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Information for unigene UN65916
| FASTA Sequence |
| Unigene ID: UN65916 | Length: 672 |
SSR | | GGATGAGAGAGAGAGAGAAGAAGATGGAGGAGGATCAGGAATCGAAGCGAAACACATCAAGAAGAAGAAGATCTGTCATCATCAGC
CTCAAAGACATTCCTCCTCTCAATCCTTCTTCTATCCCCACAAGAAACTCCTCTCTGAAGCCAAGGACAATGATGGTGCCAAGTAC
ATATAATAAAGTGAATGAGGTTGAAGAAGGCAATGCCATATCTTCCTTCTCCAACATTCAGATCGATCCTAATAGCACAAGAAGCG
TAAACACCACCACACAAGAGACTCAGCTTCTTACTAAACCCCAAGAAGAAGACGCCAAATCAGTATCTAAATGTGCTTCATTCACC
TCCCTTAGTTTTCTATTTAAGTAACATAAGAATAGCCATCTTCTTGTTTTAACCTAGAATCTTTTTGATTCATTGTGTGAATGCTT
GCTTGGGATGGTGTCCAGATGAATCCAAGAAAGGTTCAGCGAAAATGGTGTTACAGGAACTATGTATATCCAAGAGATGGAAGCCT
CCGGTTTATGATTGCTGCAATGTTGATGGACCTTGTCACATGAGATTATTTACATACAAAGTTGTGGTTGAGATTAGAGACTCTTC
AGGAACAACTGTTTTGGAATGTTTTGGTGATCTCAAACGTACGAAGAAAGCTGCCGCTGAGCACGCAGCT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_178180 RNAse THREE-like protein 1 [Arabidopsis thaliana] | 335 | 2e-029 |
| XP_002889280 hypothetical protein ARALYDRAFT_316895 [Arabidopsis lyrata subsp. lyrata] | 334 | 2e-029 |
| XP_002527323 double-stranded RNA binding protein, putative [Ricinus communis] | 221 | 3e-016 |
| NP_197532 dicer-like protein 4 [Arabidopsis thaliana] | 203 | 3e-014 |
| XP_002890129 double-stranded RNA-binding domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 203 | 3e-014 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P84634 Dicer-like protein 4 | 203 | 2e-015 |
| A7LFZ6 Endoribonuclease Dicer homolog 4 | 188 | 9e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9M8N2 At1g80650 | 335 | 1e-029 |
| B9SMV4 Double-stranded RNA binding protein, putative | 221 | 2e-016 |
| Q3SA53 Dicer-like 4 | 203 | 2e-014 |
| B9SC13 Ribonuclease III, putative | 202 | 3e-014 |
| B9H0B4 Predicted protein | 201 | 4e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G80650.1 RTL1 (RNase three-like protein 1); RNA binding / double-stranded RNA binding | 335 | 8e-032 |
| AT5G20320.1 DCL4 (DICER-LIKE 4); RNA binding / protein binding / ribonuclease III | 203 | 2e-016 |
| AT4G00420.2 double-stranded RNA-binding domain (DsRBD)-containing protein | 190 | 5e-015 |
| AT4G00420.1 double-stranded RNA-binding domain (DsRBD)-containing protein | 190 | 5e-015 |
| AT4G00420.3 double-stranded RNA-binding domain (DsRBD)-containing protein | 190 | 5e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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