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Information for unigene UN65958
| FASTA Sequence |
| Unigene ID: UN65958 | Length: 799 |
SSR | | GGTCTCTCTCTCTCTCTCGCTCACTCTCCAGCTCCTCTCTTCCTGGTCAGATCCCGTACGAACGAACATTAAAACTTTTCGGAAAA
ATGTCATGCGAGTTCTAAACCCTAATGCGGAGGTGCTCAACAAAACGGCGGCGCTTCATATGACCATAAACGCCGCCAAGGGTTTG
CAGGATGTGCTCAAGTCCAATCTCGGCCCTAAGGGAACCATCAAGATGCTTGTTGGTGGCTCGGGAGATATTAAGCTAACCAAGGA
TGGGAACACGCTATTGAAGGAAATGCAAATTCAGAATCCGACGGCTATTATGATTGCGAGGACTGCTGTTGCACAGGATGACATAA
GTGGTGATGGTACTGCTTCTACTGTCATCTTCATTGGTGAGCTCATGAAACAGTCCGAACGCTGCATTGATGAAGGAATGCACCCA
CGTGTCTTAGTTGATGGTTTTGAGATTGCTAAAAGAGCTACTCTTCAATTCCTCGACAACTTCAAGACTCCTGTGGTTATGGGTGA
TGAACCTGATAAAGAGATCCTAAAAATGGTGGCGAGAACAACACTTAGAACAAAGCTGTACGAAGGATTGGCTGATCAACTGGCTG
ACGTTGTCGTTAATTCAGTTCTCTGTATCCGGAAGCCTGAGAAGCATTGATCTGTTTATGGTGGAGATAATGCACATGCGCACAAG
TTCGACGTTGACACACGATTGGTCGAGGGGCTTGTTCTAGACATGGTTCGAGACACCCTGATGTGAACGACGCGCAGAGATTGCAC
ATCCTAACTTGCATGTGTCGCTGGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884325 hypothetical protein ARALYDRAFT_477487 [Arabidopsis lyrata subsp. lyrata] | 966 | 2e-102 |
| NP_186902 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 963 | 4e-102 |
| NP_197111 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 963 | 4e-102 |
| AAM61312 putative chaperonin [Arabidopsis thaliana] | 963 | 4e-102 |
| XP_002873754 predicted protein [Arabidopsis lyrata subsp. lyrata] | 963 | 4e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P80317 T-complex protein 1 subunit zeta | 571 | 5e-058 |
| Q3MHL7 T-complex protein 1 subunit zeta | 568 | 1e-057 |
| P40227 T-complex protein 1 subunit zeta | 566 | 2e-057 |
| Q5RCD2 T-complex protein 1 subunit zeta | 566 | 2e-057 |
| Q5ZJ54 T-complex protein 1 subunit zeta | 564 | 3e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7N0 At5g16070 | 963 | 2e-102 |
| Q8LFN3 Putative chaperonin | 963 | 2e-102 |
| Q9M888 Putative chaperonin | 963 | 2e-102 |
| Q94EZ9 Putative chaperonin | 959 | 7e-102 |
| Q9LFR8 TCP-1 chaperonin-like protein | 947 | 2e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02530.1 chaperonin, putative | 963 | 2e-104 |
| AT5G16070.1 chaperonin, putative | 963 | 2e-104 |
| AT1G24510.1 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative | 273 | 2e-024 |
| AT3G18190.1 chaperonin, putative | 269 | 5e-024 |
| AT3G20050.1 ATTCP-1; ATP binding / protein binding / unfolded protein binding | 244 | 4e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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