Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN66059

FASTA Sequence
Unigene ID: UN66059Length: 810 SSR 
GGGAGAAGGTGTTTCAAAAAAAAAGTGTTTCAAAAAAAGGAATCGATAAGAAGTCCAGAGGAAAGATTAAAAGCCTCGAATTGAAA
TCGAACCCTCGAATTGTTGCCCTCTTGATTCTCCGAGTCGTTTGATAGCAGCGGTTAGTTCCCTTAACATTGTGTAGACAAAAACA
CTCTTCTCTCATCTTCGTCTCTATCGGTCGCTGAAGTTTTAGCCTCTGCTCCTGAGCTCTCTATCTCTCTCTCTCTAGCAACAACA
ATGGAAACAAGCTGTGGTCAAAGTATGGACAGGATCAGTAAGTTGCCAGATGCTTTGCTTGTGAAGATCTTGTCTTCACTTCCAAC
AACAAAAGATGTAGTAGCCACCAGTGTTTTGTCTAAACAATGGTTATCTCTTTGGAAGATGGTGCCCAAGCTCACGTTTAATTTCG
ATGGCGGCAATGATCTCCAGGGGTTTTCAGACAGTGTTCGGAGGAGTATGCTTTCACTCGAAGCTCCGTATCTACAGAGAGTTCAT
ATGGATGTTTCACTTGGCCGAGGTGATCGTATGGATGGTTTTGGAGAGTTAATTGGAATCGCATGTGGACTCCACGTGCGTGAGTT
GGTACTCAAACTCTTTCGCCCAGATTTCAACTTGTATAAATGCTTCAAATATTCTATCAGGTTGTATAACTGTCAGACTCTGGAAA
CCTTGAAACTTCGTGGTGTTTTGGTTCCATTTCTCTAGAGTCCCTTCTCCAGTTTCTCTGAGTTCTCTTAGACTCTGCACCTTGAG
ATGTGTTCTACGACAGCGAGTCCGTTGTGACCTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q9LJF9 RecName: Full=F-box/LRR-repeat protein At3g269203211e-027
NP_190472 putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]2189e-016
NP_001190036 putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]2189e-016
XP_002866146 F-box family protein [Arabidopsis lyrata subsp. lyrata]2133e-015
Q9FM91 RecName: Full=Putative FBD-associated F-box protein At5g564002044e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q9LJF9 F-box/LRR-repeat protein At3g269203215e-029
Q8LF09 F-box/FBD/LRR-repeat protein At4g001602732e-023
Q9LJF8 F-box/LRR-repeat protein At3g269222704e-023
Q3EA38 Putative F-box/LRR-repeat protein At4g139652623e-022
Q9LXJ6 F-box/FBD/LRR-repeat protein At3g526802614e-022

TrEMBL top hits (Blast detail)Scoree value
D2DW92 Cyclin-like F-box1415e-007
C5X804 Putative uncharacterized protein Sb02g0015501407e-007

Arabidopsis top hits (Blast detail)Scoree value
AT4G00160.1 F-box family protein2732e-024
AT3G26922.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G52680.2).2704e-024
AT3G52680.1 F-box family protein2614e-023
AT3G52680.2 F-box family protein2614e-023
AT3G51530.1 F-box family protein2391e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members