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Information for unigene UN66103
| FASTA Sequence |
| Unigene ID: UN66103 | Length: 628 |
SSR | | GGGCGTTGTCGTGTTGATCCAAAGAATGATTCATTTTTATAACAGGAGGTTGTAGTACGGCAGATGAGATTATAGTCAAATTATTG
GGGTCGAGGGACAGTCCCAACCAGAATTAGAGGAGATTAAAGTTGCCGCCTCCTTTGATTTCATTCTCCGGAGGAATCAATCACTC
TTTTCTCCGATGCAGAGGAATGGGGTGAGAAGAGCCCAATCTTTATGGCGCAAGAGTTTTTTAACAAACAACTTGCATCATCATCA
TCATCCGTCTATTCCAGTCACCACCACCACATGTCTATTTTGGAGGAGCTGAGCTCCATAGACAGGATCCAGAGGAGGGTAACAGA
TTGCAATGATGGTAAAAGCTTCTGTATGCATTCTCGGAAAGTATCTCAACGACTACATGTACTTGGGACCTCATCAGTTTCTGGCA
CTCTATCCAAACATTTTCACACCTTACCACATTCACTTAACAAGCAGCAGCAGCTCCTTAGAGAAGTACCCAAGTTTGTGAAGATT
GTAGAAGTTGGTCCAAGGGATGGCCTTCAGAACGAGAAAAACATTGTTCCCACTTCTGTTAAGGTCGAACTCATTCGGAGATTGGT
TTCTGCTGGTTTGCCCGTTGTCGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880836 hypothetical protein ARALYDRAFT_481553 [Arabidopsis lyrata subsp. lyrata] | 218 | 5e-016 |
| NP_850088 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 208 | 8e-015 |
| NP_565629 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 208 | 8e-015 |
| NP_850087 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 208 | 8e-015 |
| XP_002314006 predicted protein [Populus trichocarpa] | 207 | 1e-014 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81027 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 208 | 4e-016 |
| Q29448 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 169 | 1e-011 |
| P97519 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 164 | 5e-011 |
| A8WG57 Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 | 163 | 6e-011 |
| P38060 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 163 | 6e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EBT5 Putative uncharacterized protein At2g26800.3 | 208 | 5e-015 |
| B9HNI0 Predicted protein | 207 | 7e-015 |
| A5B4X9 Putative uncharacterized protein | 206 | 9e-015 |
| B6U7B9 Hydroxymethylglutaryl-CoA lyase | 201 | 3e-014 |
| B9RU86 Hydroxymethylglutaryl-CoA lyase, putative | 201 | 3e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26800.1 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 208 | 4e-017 |
| AT2G26800.3 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 208 | 4e-017 |
| AT2G26800.2 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 208 | 4e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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