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Information for unigene UN66233
| FASTA Sequence |
| Unigene ID: UN66233 | Length: 695 |
SSR | | GGATCTTAACAAAATCACATCTCTCTCTCTCCCTTTCTTGTTGCTTATCCATTTTCTCTCTCTCTTTCTCTCAGACTTCCTTAAAT
CGATCCTCTCAAATCCAAAAACAGAGCCCTCTTTTGATTCGAAACCCTCTCCCTTGTTCAAAATGACAGGCTTCTCTGTGTCCCTG
ATCGTGTCGAACTTATCAAACGTCGCCTCGTATCTGTCTCCCATCTTCGAGACCATCCCGTCGACGAAGGTTGTTCCAGCGCAGAT
CGAGGAAGCCGGTGTGACGGGAGAGCTAGAGGAAAGGCTTGGGAAATGGCAATACAAGAGTAAAAGACAGAGCGTGATCCACGAAG
GTTACATGTTTGCGTTGCTTGTTGACCAAGAATATGAGCGGTGGCCTGAAGCGGAGACTAGACAGCGGAGATGGGTTGGTTTGGAC
GAAGCGAGAGAGGTTTGTCAGAATTGGTGGATGAGAGAAGCTCTCGAAGCATTTGTTAACCTGAAATGTGAGGCCGAGGAGGTTGA
GATTTGAAGCTGATGATGTTTAGTGTTTGGTGGAACAGAGGTTTTAGACTTAGAAACCTGTCGTCTGGGATCAGAAGAAGAAGCTT
CCTGAGGGGATTCGTTGGTTTGGACGAAGCGAGAGAGGTTTGTCAGATTTGGTGGATGAGAGAAGCTCTCGAAGCATTTGTTAACC
TGAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173266 nudix hydrolase 4 [Arabidopsis thaliana] | 414 | 1e-038 |
| XP_002890268 hypothetical protein ARALYDRAFT_312784 [Arabidopsis lyrata subsp. lyrata] | 414 | 1e-038 |
| XP_002888932 predicted protein [Arabidopsis lyrata subsp. lyrata] | 350 | 3e-031 |
| NP_177495 nudix hydrolase 21 [Arabidopsis thaliana] | 335 | 2e-029 |
| AAG30977 unknown protein [Arabidopsis thaliana] | 335 | 2e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE73 Nudix hydrolase 4 | 414 | 6e-040 |
| Q8VY81 Nudix hydrolase 21, chloroplastic | 335 | 9e-031 |
| Q9LQU5 Nudix hydrolase 18, mitochondrial | 244 | 3e-020 |
| Q9ZU95 Nudix hydrolase 17, mitochondrial | 234 | 4e-019 |
| Q93ZY7 Nudix hydrolase 12, mitochondrial | 195 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IEF7 Predicted protein | 280 | 3e-023 |
| C6SWX9 Putative uncharacterized protein | 274 | 1e-022 |
| B9I2C1 Predicted protein (Fragment) | 271 | 3e-022 |
| B9P8I7 Predicted protein (Fragment) | 271 | 3e-022 |
| C6T3D6 Putative uncharacterized protein (Fragment) | 271 | 3e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18300.1 atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4); hydrolase | 414 | 6e-041 |
| AT1G73540.1 atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21); hydrolase | 335 | 8e-032 |
| AT1G14860.1 atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18); hydrolase | 244 | 3e-021 |
| AT2G01670.1 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17); hydrolase | 234 | 4e-020 |
| AT1G12880.1 atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12); hydrolase | 195 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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