RadishBase

| | | |

Information for unigene UN66236

FASTA Sequence

Unigene ID: UN66236	Length: 721	SSR
GGAAGTTCAGTTCTGACACTCTCAATGAACTGTTCCCGCAAAAAAAAAAAAAAAAAAAAACAGAGAGGTGGCAAAAGATGAAGTGG AAGTGGTGAGAGACGGAAAGCAAATAGAGTCACGAGAATCATTGGCAACTCATCTCTTTGCAAAGAAGAAAAAAGTAAATGTTGAA TCTCTCGAAATCTTAACTTTTAGGGTTCGAGCTCTGTCTAGAGATTTGGCCCTTTTTGTTGATGAGACCTCCTCTGCAAGATCCTC GTGATTCCACTTTAACGCCTCCCTCCCTCCTTTCTGAAAAAATATTCAAAGTATAAATTTTTTTATTTATCTCCCTTTTTAAAGGG TTTCTTTTTCCTTTTAAACTTCTCCAGAGTTCGCAACTTTCTCAGCTATGAACGGCGACGACGGAGAACGTTTTCAGGTGGGCTAT AACGATGAACCTGTGCCGTGGGTCAAAAACCCAGAAGAAAACTGGTTTAACAACCCACAAGACGCTTCTCAAAATGAGTTCGGATT CAACAGTGGTGGGTTTCCCTTGAACCCTTCAGAGAATCTTCTCCTCCTTATTCAGCAATCCATCGACTCCTCTTCTCCCTTGCAAC ACTTCACACTCGACGCTACTACTCCTCAACAACAAGAGTCTTTCTTAGCTACAAAAGCTTGCATGGCTTCTCTCCTCAACGTCCCT CCCGACAACAACAACAACAACCCTTTAGATGAC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002889974 predicted protein [Arabidopsis lyrata subsp. lyrata]	303	1e-025
NP_172746 uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]	276	1e-022
ABK41843 bHLH protein [Overexpression vector pLE12860OE]	276	1e-022
ABK41847 predicted F-box and bHLH containing protein [Overexpression vector pFC12860OE]	276	1e-022

Swiss-Prot top hits (Blast detail)	Score	e value
Q9LPW3 Transcription factor SCREAM2	276	6e-024
Q9LSE2 Transcription factor ICE1	153	1e-009

TrEMBL top hits	Score	e value
No hits found

Arabidopsis top hits (Blast detail)	Score	e value
AT1G12860.1 SCRM2 (SCREAM 2); DNA binding / transcription factor	276	6e-025
AT3G26744.1 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor	153	1e-010
AT3G26744.2 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor	153	1e-010
AT3G26744.4 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor	153	1e-010

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	1			100%

Unigene Members