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Information for unigene UN66240

FASTA Sequence
Unigene ID: UN66240Length: 732 SSR 
GGGACGCCAAAACTCTCTCTCTCTCGACGACGACGACCACCACTCTCTACCGGAAAATGATTGAACCGCGGGAGATCTCATCAGAA
TGAGTAACGCGCTTCTCGACATCGATCCTATCGACCTTCAATTCCCTTTTGAATTGAAGAAGCAGATCTCTTGCTCTCTCTATTTG
GCTAACAAGACCGACAATTATGTAGCCTTCAAGGTTAAAACGACGAATCCAAAGAAGTACTGCGTGAGGCCTAACACTGGCGTTGT
TCTTCCCAGATCCTCTTCTGAAGTTCTTGGTTTGTTTTTGTCTTACTGAGAAATTGCAAATTCCAAAAGCTGAGATTTGTTGTTGT
CTTTTTGGAAAACTTAGTGACGATGCAAGCGCAGAAGGAAGCTCCTGCTGATATGCAGTGCAAGGACAAGTTCTTGCTTCAATGTG
TTGTGGCTACTCCCGGTGTCACTCCCAAGGATGTTACTCCCGAGATGTTTAGCAAAGAGGCGGGGAATCGAGTTGAGGAGACGAAA
CTGAGAGTTGTCTATGTTGATCCACCACGACCACCTTCACCGGTTCATGAAGGATCAGAAGAGGGCTCTTCGCCAAGAGCTTCCGT
CTCTGACAATGGAACAACAACAACGCTTCTGACTTTACTGCTGCTCCAAGATTTAGCGTGGACAGGCTTGAACCTCAGATAACCCA
TCTGAGCGAGAGCGCTCATCACAAGCTCACCGAGGAAAGAACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876570 VAMP/synaptobrevin-associated protein 27-1 [Arabidopsis lyrata subsp. lyrata]4472e-042
NP_001030904 vesicle associated protein [Arabidopsis thaliana]4151e-038
XP_002880160 hypothetical protein ARALYDRAFT_483647 [Arabidopsis lyrata subsp. lyrata]4132e-038
NP_182039 VAP-like protein 12 [Arabidopsis thaliana]4113e-038
NP_001030903 vesicle associated protein [Arabidopsis thaliana]4023e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q9P0L0 Vesicle-associated membrane protein-associated protein A1387e-008
Q5R601 Vesicle-associated membrane protein-associated protein A1387e-008
Q9Z270 Vesicle-associated membrane protein-associated protein A1351e-007
Q16943 Vesicle-associated membrane protein/synaptobrevin-binding protein1351e-007
Q9WV55 Vesicle-associated membrane protein-associated protein A1342e-007

TrEMBL top hits (Blast detail)Scoree value
Q2V3M6 Putative uncharacterized protein At3g60600.34157e-039
Q9SHC8 At2g451404112e-038
Q2V3M7 Putative uncharacterized protein At3g60600.24022e-037
Q8VZ95 At3g606004022e-037
Q8LDM1 Putative VAMP-associated protein3987e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G60600.3 VAP (VESICLE ASSOCIATED PROTEIN); protein binding4155e-041
AT2G45140.1 PVA12 (PLANT VAP HOMOLOG 12); structural molecule4111e-040
AT3G60600.1 VAP (VESICLE ASSOCIATED PROTEIN); protein binding4021e-039
AT3G60600.2 VAP (VESICLE ASSOCIATED PROTEIN); protein binding4021e-039
AT1G51270.2 structural molecule/ transmembrane receptor3359e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members