Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN66250

FASTA Sequence
Unigene ID: UN66250Length: 675 SSR 
GGGAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCTCTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCA
ATGGTCAGGCTCCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAAGGCTGGTCAATTCACAATGTTCATA
AGACTCCTCAAGAGCACCCAAGCCGCAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACCAAGTCAACATC
ACCACGGGAGTTGTCAGCGCAACGGTAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGATCAAGTTTTGCT
GCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCCTGCGCCTGAGAAAGGTGGCTTGGTTTCGAAAGGTTCAGCTCCAAGTG
GTGATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATATTGGTTCATCTCCACCATGGCAGCCATTGCTGCT
TCTTCTATGTGGATATAACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGTAATTTGAGTTTTGTGTTATC
GTGTTATTGTTTTGGTTCAAAAAATTACGATTGAGATTGCACAATTTTTTTGATGGAAAATGAGTATTCTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM62616 arabinogalactan protein-like [Arabidopsis thaliana]3899e-036
NP_195937 fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana]3881e-035
XP_002873077 hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata]3772e-034
AAT37956 fasciclin-like AGP 13 [Populus tremula x Populus alba]2276e-017
XP_002326348 predicted protein [Populus trichocarpa]2251e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEJ6 Fasciclin-like arabinogalactan protein 113886e-037
Q9ZWA8 Fasciclin-like arabinogalactan protein 91808e-013
Q9FFH6 Fasciclin-like arabinogalactan protein 131744e-012
Q8LEE9 Fasciclin-like arabinogalactan protein 121701e-011
Q9SIL7 Fasciclin-like arabinogalactan protein 61521e-009

TrEMBL top hits (Blast detail)Scoree value
Q6J191 Fasciclin-like AGP 132274e-017
B9MTA8 Predicted protein2257e-017
A9P8F7 Predicted protein2212e-016
B9S0M8 Putative uncharacterized protein2203e-016
Q6J193 Fasciclin-like AGP 112104e-015

Arabidopsis top hits (Blast detail)Scoree value
AT5G03170.1 FLA113894e-038
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)1807e-014
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)1744e-013
AT5G60490.1 FLA121701e-012
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)1521e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members