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Information for unigene UN66326
| FASTA Sequence |
| Unigene ID: UN66326 | Length: 790 |
SSR | | GCAGAGCTCATAAAACGTCGGCAAATGAGAATCAAAAGATGTTTCTTACAAATGAGTAACATATTTCAATCTTGTAAACTACAGAC
ACAAATAATGGACACAACCTACCAAGTCCTCTTCTGCAAAATCTTTCTTTTAGCATTCGATGATTACAAAACATATAGTAGTAGTT
TTCATAACCCAACAAGTTCTTCCGTCTGTGAGCCAACATAATCCAAAGACCCTTCTTGTTCTTTATCACACAACACAGTTTCTTTT
GCACCATCAACATCATCATGTTCTTCATAGTCATCTTCATCCTCATCCTCATCCTCTTCCTCATCACTACTAGTGATATAATTGTC
TTCATCATCATCATCATCATCATCAGTTCGGTAGACTCCAGCAAGGCTCGCTGTCTTCTCATCTACAAGACCAGTAACTTCCTTAG
CTTCCTCTAGCTCATCTTGAGTCGAAGCCAACGACAAGAGCACATTCTTAGCTTTCTGATCAGGTGGCACTCCACAGCTCTCCATC
TCCTTGTACCAACTAAGAGCGCTCCCGAAATCCTTGCACCTCCCAGACGCATCCATGATAGTTGTCAAAATCGTCTGATTCGCTTT
GATGCCACTTAACCTCATTTTCTCGTACACCTCCACAACCTTATCAAGATCGTTTGCTTTCGCATAACCTTTTATCATCGTCCCAT
AGGTTACTACATTCGGTTCAAAACCATCCACTTTTATCCTCTTGAAGAATTTCTCAGCACCCTCCATGTCTGAAGCATTGACATAC
GCTGATAACATTGTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191463 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 699 | 1e-071 |
| NP_974457 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 699 | 1e-071 |
| CAB86932 putative protein [Arabidopsis thaliana] | 699 | 1e-071 |
| XP_002878256 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 693 | 7e-071 |
| XP_002298285 predicted protein [Populus trichocarpa] | 554 | 9e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYT2 Pentatricopeptide repeat-containing protein At3g59040 | 699 | 7e-073 |
| Q9LUJ4 Pentatricopeptide repeat-containing protein At3g22670, mitochondrial | 168 | 2e-011 |
| Q9LR67 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial | 163 | 9e-011 |
| Q0WMY5 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic | 161 | 2e-010 |
| Q76C99 Protein Rf1, mitochondrial | 156 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EAH8 Putative uncharacterized protein At3g59040.2 | 699 | 1e-071 |
| B9GI17 Predicted protein | 554 | 6e-055 |
| B9T2X9 Pentatricopeptide repeat-containing protein, putative | 478 | 4e-046 |
| C5YIC9 Putative uncharacterized protein Sb07g005470 | 456 | 1e-043 |
| A2YS10 Putative uncharacterized protein | 437 | 2e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59040.2 pentatricopeptide (PPR) repeat-containing protein | 699 | 6e-074 |
| AT3G59040.1 pentatricopeptide (PPR) repeat-containing protein | 699 | 6e-074 |
| AT3G22670.1 pentatricopeptide (PPR) repeat-containing protein | 168 | 2e-012 |
| AT1G03560.1 pentatricopeptide (PPR) repeat-containing protein | 163 | 9e-012 |
| AT1G63630.1 pentatricopeptide (PPR) repeat-containing protein | 161 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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