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Information for unigene UN66339

FASTA Sequence
Unigene ID: UN66339Length: 767 SSR 
ATCCACAAGTTCTGTTTATGTAAAAGATTCCATGTATATACAAATAGGAAGCTACTCACCACTAAGAGAGTGCATTCTTGGTCTCC
TAAAAGTCAACAAACAGATCTAAACATATAAACTACGAACTGTCTGTGTTTAGAATCATGAATTTCAAGATGGTCAAGACATTTGA
ATCCATGGAGAGGCCTCATAACTCTCTATGAATGCAAATTTCTTGGCTACTCTGAAATTTTATGACACTAAACAAGACAGACGTTG
TTGCCAATCCCATCAGCTTCTAATCTAACTTATCGAAGGTAAAAGAAGACAATGAAGAGAGCTAGAGCGAGCGCAAGTGCAGCAAA
AAAAACACTCCAAACCCATAACCTGTGAGCTCTTCTACGCTTTAAGATGGCTTTAGGAACAGTGTCGTTTCCTTTCTTGTGATGTC
TGTACCTAAGACTTCTCTGTTTACAACTCGCTGATCTCCCATTTAGTAGTTTCTCCTTACTATTCTTCTCCTGCTCTGATCCCTCA
GTGACTGTCTCTGGTGTCCTCTCTAGATCCTTCTTCTTCTTCTTAGCTCTCTTCTCAAGCTCCTTGAGTTTCTTCTCAGCTTCCTT
CTTATCTCTTACGGCAGCTCTAGCAGCAGCTTTCTCATGTAGCTTCCTTTTCCTTTCCATCGCTAGTTTAGCTTTCTCTAGCTGCT
CTTCTCGCTTCTTCTCCTTCAAACTCTCTTCTTCCTCCTTCTCATCACTTTCCTCCTCCTCCTCCTCCTCATTACTAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891729 hypothetical protein ARALYDRAFT_314636 [Arabidopsis lyrata subsp. lyrata]5011e-048
NP_175719 putative proton pump interactor protein [Arabidopsis thaliana]4948e-048
AAF87866 Unknown protein [Arabidopsis thaliana]4884e-047
XP_002885079 hypothetical protein ARALYDRAFT_478964 [Arabidopsis lyrata subsp. lyrata]3782e-034
XP_002285016 PREDICTED: hypothetical protein [Vitis vinifera]2951e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q54J55 Myb-like protein X1512e-009
Q55FI4 Nucleolar protein 581503e-009
A5E4P1 Protein PXR11485e-009
P54696 Myosin-H heavy chain1468e-009
Q869E1 DNA ligase 11441e-008

TrEMBL top hits (Blast detail)Scoree value
Q8VZN4 Putative proton pump interactor protein4946e-048
Q9LNN6 F8L10.3 protein4883e-047
B9HZV0 Predicted protein2859e-024
D5L6G0 Proton pump interactor 12732e-022
B9T6N7 DNA double-strand break repair rad50 ATPase, putative2723e-022

Arabidopsis top hits (Blast detail)Scoree value
AT1G53110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: PPI2 (proton pump interactor 2); protein binding (TAIR:AT3G15340.2); Has 9097 Blast hits to 6362 proteins in 564 species: Archae - 111; Bacteria - 824; Metazoa - 3326; Fungi - 733; Plants - 436; Viruses - 39; Other Eukaryotes - 3628 (source: NCBI BLink).4953e-050
AT4G27500.1 PPI1 (PROTON PUMP INTERACTOR 1); protein binding2515e-022
AT3G15340.1 PPI2 (proton pump interactor 2); protein binding2499e-022
AT3G15340.2 PPI2 (proton pump interactor 2); protein binding2499e-022
AT5G36780.1 AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.2112e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

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