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Information for unigene UN66393
| FASTA Sequence |
| Unigene ID: UN66393 | Length: 524 |
SSR | | AATCATACTTAACATAGTAAAATTTATATCCAACATAAATTCATAATATTTTACAGAATCCGTAAGCGTATTAAATCTTCATACAT
TCATACATTAAAGTTCATACACAATCCAAAAGCATATTAAACTTCATACAATCATACTCCTTCCTCGTTCCCTCCTCTTCCTCCTC
TGTCTTCTCCTGAAAACTTTGTCAACAACTTCAGTCTCCTCATCATGTTTTCTTTTCTTCTTCTTCTTCTTCTTCTCCTCGTCGGC
GGATGCAAATTTTCATCTTCAAGTCAGTCCGTCCAGCCAAGAAATAGTGAGGAACAAACATGAAGTCTTTGTCAGGAGTTTGGAAG
CTCACTTTCTGAATCCTATTCATCTCACTCAATCCAAACGACATGGTTTTATCACCTCCGTACGACGAGTATGAAAGTTGAAAGGA
GAATTCCGAGACTCCAGGAGCACAAGGTGCTATACAGTTGACAGTCACATACACTCCTTGTTCCTCCTCGAAACATTGAATCGCAA
CCAATGGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176835 E3 ubiquitin-protein ligase SINA-like 2 [Arabidopsis thaliana] | 351 | 1e-031 |
| NP_176834 E3 ubiquitin-protein ligase SINA-like 1 [Arabidopsis thaliana] | 291 | 1e-024 |
| BAA85450 S-locus protein 1 [Brassica rapa] | 267 | 6e-022 |
| CAC80703 SIAH1 protein [Brassica napus] | 265 | 1e-021 |
| CAB89182 SIAH1 protein [Brassica napus var. napus] | 265 | 1e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C6H3 E3 ubiquitin-protein ligase SINA-like 2 | 351 | 7e-033 |
| Q9C6H4 E3 ubiquitin-protein ligase SINA-like 1 | 291 | 6e-026 |
| Q9FKD6 E3 ubiquitin-protein ligase SINA-like 8 | 211 | 1e-016 |
| Q9FKD7 E3 ubiquitin-protein ligase SINA-like 7 | 202 | 1e-015 |
| Q9FKD5 Putative E3 ubiquitin-protein ligase SINA-like 9 | 197 | 5e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ST20 S-locus protein 1 (Fragment) | 267 | 5e-022 |
| Q93YL2 SIAH1 protein | 265 | 8e-022 |
| Q9M4F3 SIAH1 protein | 265 | 8e-022 |
| A0ME23 Putative uncharacterized protein (Fragment) | 205 | 7e-015 |
| Q1G392 Putative uncharacterized protein | 205 | 7e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G66620.1 seven in absentia (SINA) protein, putative | 351 | 7e-034 |
| AT1G66610.1 seven in absentia (SINA) protein, putative | 291 | 6e-027 |
| AT5G37900.1 seven in absentia (SINA) family protein | 211 | 1e-017 |
| AT5G37890.1 seven in absentia (SINA) protein, putative | 202 | 1e-016 |
| AT5G37910.1 seven in absentia (SINA) family protein | 197 | 5e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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