Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN66433

FASTA Sequence
Unigene ID: UN66433Length: 759 SSR 
CGTAAAATGCTTTCTTAAGATTCATTCAACCATGTATTTCAACAATAAAGAGTCGCTCACTGATGATGATACACACATCAAAAAGA
TGTCTTCATTGGTTCCTAAACGTTTCTCTCACTAAGCAGAACGATATTCACATTACAAAGGATAATTAACTCATGAACAAACATGT
CTTGCGCTGTTCCCACACCAATCTTCTCAAGGGCAGGACCATTTTAAACCTAGTGATGTTCCTGTGTATCATCATTCATCTGGTGG
TTGGAAGGAAGACTCGAATGAGGTCTTTAGCAAGGACCCTTTTTCTACACGTAGGGCATTTAGCTTGAACAGATACAGCGAGCTTT
ATGCATTTTTTGCAAAAAATGTGACCACACTTTGTTGACACCTCTTCGGTAAATGGACACAGACAAATTGGGCAGTTAAACTTTGG
TTCCTCAACAGGAGGAGCTACGGTCTTAGACTTTCTCGGACTGTTAAGCTCAACATTAGCTTGATCAGATTGACGCTTTGTGCGGT
TTTTGCTTAGTCTAGTGGTACCGCCTGACTCTACATCAACTACCAAGGGTCCTCGCTGTGAGCCTCCAGATTTGTGTCTTTTAGCT
CGATCAAAAGCAGAAGCAGTTGATTCGACAACATCATCATCATCATCATCTTCAATAGCATCAACATCGATGGTAGGAGGACCAGA
CACCACTGGAGGAGGTTGTTCAGTTCTTTGTTGATCTCGCTGGTGTTGGCTTGGTGTCCATTCACATTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882517 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5621e-055
NP_187376 RING/U-box domain-containing protein [Arabidopsis thaliana]5503e-054
BAC43036 putative RING finger protein [Arabidopsis thaliana]5432e-053
NP_568701 RING/U-box domain-containing protein [Arabidopsis thaliana]3649e-033
AAK76707 unknown protein [Arabidopsis thaliana]3649e-033

Swiss-Prot top hits (Blast detail)Scoree value
P19474 52 kDa Ro protein1361e-007
Q9QZS2 RING finger protein 41252e-006
O88846 RING finger protein 41243e-006
P78317 RING finger protein 41217e-006
Q3MV19 TNF receptor-associated factor 6-A1217e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SFV0 Putative RING zinc finger protein5502e-054
Q8GX56 At3g072005431e-053
Q8GS41 Putative RING zinc finger3646e-033
Q94AH4 Putative uncharacterized protein At5g48655/K15N18.13 (Fragment)3646e-033
Q8LF11 Putative uncharacterized protein3638e-033

Arabidopsis top hits (Blast detail)Scoree value
AT3G07200.1 zinc finger (C3HC4-type RING finger) family protein5518e-057
AT3G07200.2 zinc finger (C3HC4-type RING finger) family protein5518e-057
AT5G48655.2 zinc finger (C3HC4-type RING finger) family protein3653e-035
AT5G48655.1 zinc finger (C3HC4-type RING finger) family protein3653e-035
AT5G48655.3 zinc finger (C3HC4-type RING finger) family protein3653e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members