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Information for unigene UN66560
| FASTA Sequence |
| Unigene ID: UN66560 | Length: 648 |
SSR | | AACATTCAAATAAACCAGACGTTTATGACCTTTTCTTATCCTGGTTATATATACTTTAGTAAGGAGAGACAGATTTATATATGAAT
GAATTTGAATCAATAAAGAATGAATTTATCCTCCATTTTTTTTGCAGTAATACTACCCTATATACATATTACACGTCGAAGCAAAG
AGAGGAAACCAATGAGAACAAAAAAAATGATGATGCATGATGCATGTCTTATACTACCAAGCTCAATGCATGTCTTTCTTCTTTTT
TTTTTGTATTAAGAGTGTCTGTTACAAAATTAACTCTCTCTTTAGTTTCTCTTTTTTGTGTGTGTGTGTGTGTTACACTCGGTTCT
TTCTCGCTCTCTTCGATAGCACCCTGCCTGGATCTTCTCCATCTCCTAGTATATATACGTGCCATTTTCTTATATATATTTTGTTT
GCCTCTACTCTTCTAATGAATGTCTTGATGAACGGTACAAATCATACGGAGCCCAAAGATGATCAACAATACAAGGCTTCCTTGAA
TCTAATCTCAACCACGGCTTCCCTTTCCCACTCCAATGAAGAAGACTTATCGGACCCGGATGCAACGTTCTACATTTCCCTTCGAA
GTTATCACCTCCTAGACCATGCTGGTTCCACCGATGATCAACAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD96888 hypothetical protein [Cleome spinosa] | 403 | 2e-037 |
| BAC43039 putative glycosyl transferase [Arabidopsis thaliana] | 400 | 4e-037 |
| NP_187277 putative galacturonosyltransferase-like 4 [Arabidopsis thaliana] | 400 | 4e-037 |
| XP_002884565 hypothetical protein ARALYDRAFT_477926 [Arabidopsis lyrata subsp. lyrata] | 400 | 4e-037 |
| XP_002516817 transferase, transferring glycosyl groups, putative [Ricinus communis] | 399 | 6e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M8J2 Probable galacturonosyltransferase-like 4 | 400 | 2e-038 |
| Q0V7R1 Probable galacturonosyltransferase-like 3 | 318 | 7e-029 |
| O48684 Probable galacturonosyltransferase-like 8 | 317 | 9e-029 |
| Q9LHD2 Probable galacturonosyltransferase-like 10 | 310 | 6e-028 |
| O04536 Probable galacturonosyltransferase-like 9 | 306 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1KUU8 Putative uncharacterized protein | 403 | 1e-037 |
| B9RSU8 Transferase, transferring glycosyl groups, putative | 399 | 4e-037 |
| B9HKM7 Glycosyltransferase, CAZy family GT8 | 385 | 2e-035 |
| B9HVK1 Glycosyltransferase, CAZy family GT8 | 381 | 5e-035 |
| B9SFN1 Transferase, transferring glycosyl groups, putative | 374 | 3e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06260.1 GATL4 (Galacturonosyltransferase-like 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 401 | 2e-039 |
| AT1G13250.1 GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 318 | 7e-030 |
| AT1G24170.1 LGT9; polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 317 | 9e-030 |
| AT3G28340.1 GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups | 310 | 6e-029 |
| AT1G70090.1 LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 306 | 2e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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