Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN66565

FASTA Sequence
Unigene ID: UN66565Length: 709 SSR 
ATGGGAACTTTTGTTTTTTGTTTCTTTGGTTTTTAGTTGCATTGATAAAGATTAGAGTTTGCTTGTTCCCTAAGTTAACAGAAGAT
GATAAATACACTCACACAGACACTCTGAAGATCCGTCCTTTTTCCCTCTTCAGCCTCCCTACCCAACAAACTCAAATAAACCGATA
ACCTGTATAACCGGTTATCAGCTTTATAGTACACAACCATGAGGCCTGAGCGGTGGACTGAAACCGCCACCTAGTAAGAGTTTTGC
CATAGGTGCTGCTGCGGTGTTTGCTTTGAGGGCTGGCCTTGCGAGCCACCTTCCCTTGGGTTTCGCTGTTGTTGTTGTTGTTGGTT
AAGAGAGAAGTTTCCGGCTCCAACATTGCTCGAACTCCCGAATCCATATGGGGAGGAGATGGGGGCGGACTGAGGCAAACTACTGG
GGGAAATGTTGTTTTTGTACTGAGGAAGCAAAGCGGCAGGTGACTGGTGGTATGAGCTATTACCAGAAAATGCTTGCTGGAAAGCC
GAGGGCATGTATGGGTAGCCCTGAGGCATCAAAGGGTAACTGATCATGTTGGCAAAGTGAGTTAGAGGCACAGTATGCTGAGAATA
AATTAGCAGATGATCTGGAATTAAGACAGCAGGTCTATCCTCCTCATGAGAGGAGTATTTATCATGGTTTTTCTATGCTCAATTCT
TGAAGGTTAGCAGCAACAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881327 hypothetical protein ARALYDRAFT_321144 [Arabidopsis lyrata subsp. lyrata]3612e-032
NP_174229 uncharacterized protein [Arabidopsis thaliana]3503e-031
AAG51729 unknown protein; 16040-11188 [Arabidopsis thaliana]3503e-031
AAG51735 unknown protein; 25451-20507 [Arabidopsis thaliana]3503e-031
AAL58943 At1g29350/F15D2_27 [Arabidopsis thaliana]3503e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8VZT4 Putative uncharacterized protein At1g293703502e-031
Q8W0Z3 At1g29350/F15D2_273502e-031
Q9C7R4 Putative uncharacterized protein F15D2.283502e-031
Q9C7R5 Putative uncharacterized protein F15D2.273502e-031
B9I113 Predicted protein3422e-030

Arabidopsis top hits (Blast detail)Scoree value
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).3502e-033
AT1G29370.1 kinase-related3502e-033
AT4G18150.1 unknown protein1502e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members