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Information for unigene UN66577

FASTA Sequence
Unigene ID: UN66577Length: 766 SSR 
ATGTCCAATGAATGAATATTCAGAATAATCTTTTTTACATTACAATATTTTGGGTATTAACAAGCATTTATAAACACCCAACTAAG
TATCTTTTTAGAACCAAAACAGGTTCTTAACTTCTTTGTGATTGGGTACAAGTGGAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAA
GAAAAAGAAAAAGAAAAAAAAAAACTGAATCAATGTAATTGTCAGAAAGACCTTTAGCAATCAGCAAAAAAGTCTGGTTCAGGAGG
TTTCTGAACCTTCAGCAGCTCTTTAGTTGGTTGTGACAAAGCCAACAACTTGGCAGTCCGGTTCTTGCGAACGCTACGAAGCGCAT
TAGCTGCAAACCTCGAAGCCAAGAACGTCGCTCTGATGCTATAATGACTGCCTCCCGTAGCAATAAGCCTCGCAGCAAAAGACTCT
TCCTCTAGCTCCTCCTCTTCTTTTCTAAGCTGCTCAAGTTTCTTCCTCTTCGTGTACCTTCTCCACGCAGCCTGCATGAAGCAAGC
GGCCCAAGTCCTCCACTGCTGCGAGTAGAATCTGAAAGTGTGTTGCACTTGTCTGCTGTGCAGTCTCCTGAACTGACTCGCCACGA
ACTTGAGCTCATCAGCTATCAAAGCGAACGCTTCTACTTCGGTTAAGGCCTTGACGGTTCTTGTCGAGGACGGTAGGTTAGAGCCT
GATTTGGGGATCTAGGGCCCACGTCAGAAGCTCGTCGCCGCAGAAGTCTCCTTCTTTAAGTAAGCTGCGGTTGTAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565560 cyclic nucleotide gated channel [Arabidopsis thaliana]6481e-065
XP_002880536 ATCNGC6 [Arabidopsis lyrata subsp. lyrata]6443e-065
XP_002325129 predicted protein [Populus trichocarpa]5557e-055
XP_002278464 PREDICTED: similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel [Vitis vinifera]5549e-055
XP_002264161 PREDICTED: hypothetical protein [Vitis vinifera]5054e-049

Swiss-Prot top hits (Blast detail)Scoree value
O82226 Probable cyclic nucleotide-gated ion channel 66485e-067
Q8RWS9 Probable cyclic nucleotide-gated ion channel 54863e-048
Q9S9N5 Putative cyclic nucleotide-gated ion channel 74684e-046
O65717 Cyclic nucleotide-gated ion channel 14326e-042
Q9M0A4 Putative cyclic nucleotide-gated ion channel 94228e-041

TrEMBL top hits (Blast detail)Scoree value
B9IMD2 Predicted protein5555e-055
B9STR6 Cyclic nucleotide-gated ion channel, putative5035e-049
B9RIK4 Cyclic nucleotide-gated ion channel, putative4713e-045
B9DGT1 AT5G57940 protein4605e-044
B9GVL4 Predicted protein4561e-043

Arabidopsis top hits (Blast detail)Scoree value
AT2G23980.1 ATCNGC6; calmodulin binding6485e-068
AT1G15990.1 ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7); calmodulin binding / cyclic nucleotide binding / ion channel4684e-047
AT5G57940.1 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel4603e-046
AT5G57940.3 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel4603e-046
AT5G57940.2 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel4603e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members