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Information for unigene UN66718

FASTA Sequence
Unigene ID: UN66718Length: 762 SSR 
GATTCTCTGTGTCTGTGTGTGTGTGTCAGTTGTTTTGTCTTTAAATTTGCCTTTTTTGTTTATGTAAAACAGTCAATAGGCTCTCT
GCAGAAGAAGTACTCAGTAGGGTCTTTTGAGTTGCTGAGCAAAACAGCTCCGATCCAAGCACTTTCACTTCTCATCTTCGGCCCCT
TTGTTGACTATTTCTTGAGCGGCAAGTTCATAACTACATACCACATGACTTATGGTGCCATTGTAAGTAATAATTCTCTCAACTTT
TTTTTGCCTTTTAGAGGATTTAGATGCCACTCCTCACTTTTATTTCTATCTCTTTGCAGTTCTGTATTCTTCTCTCCTGCGCATTA
GCCGTATTCTGTAACATAAGCCAATACCTCTGCATAGGAAGATTCTCTGCAACATCATTTCAAGTTCTAGGCCACATGAAAACAGT
TTGCGTCCTAACACTCGGATGGCTTCTCTTTGATTCGGAGATGACATTCGAGAACATCTCCGGCATGGTCGTAGCTGTTGTCGGAA
TGGTGATCTATAGTTGGGCGGTTGATCTAGAGAAACAGAGAAACGCAAAGTCAACTTCTCAAGGGAAAAACAGTATGACAGAAGAT
GAGGTTAAGCCACTCAAGGAAGGAATAGAGCATATCGATTTGAAAGATGTTGAGCTCGGTGAGACTAAAGTATAGATAGATACAAT
GTGTGTTCTTTTATCAAGTTTCAAATTACACGTCGAATGCTTAATATATTTTTTAGACTATAAAGTACAAACAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33722 unnamed protein product [Thellungiella halophila]5727e-057
XP_002889095 hypothetical protein ARALYDRAFT_476826 [Arabidopsis lyrata subsp. lyrata]5655e-056
NP_565138 Nucleotide-sugar transporter family protein [Arabidopsis thaliana]5646e-056
XP_002893149 hypothetical protein ARALYDRAFT_889562 [Arabidopsis lyrata subsp. lyrata]5305e-052
BAC42299 unknown protein [Arabidopsis thaliana]5289e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXL8 Uncharacterized membrane protein At1g068902158e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SRE4 At1g76670/F28O16_45644e-056
Q8GYG5 Putative uncharacterized protein At1g21070/T22I11_105286e-052
Q8LG49 Putative uncharacterized protein5286e-052
Q9LPU2 At1g210705286e-052
A5BK42 Putative uncharacterized protein4945e-048

Arabidopsis top hits (Blast detail)Scoree value
AT1G76670.1 transporter-related5643e-058
AT1G21070.1 transporter-related5293e-054
AT5G42420.1 transporter-related4424e-044
AT5G42420.2 transporter-related4424e-044
AT2G30460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2); Has 782 Blast hits to 581 proteins in 90 species: Archae - 0; Bacteria - 6; Metazoa - 140; Fungi - 34; Plants - 501; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).2212e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members