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Information for unigene UN66731
| FASTA Sequence |
| Unigene ID: UN66731 | Length: 707 |
SSR | | GGGCCTATTTCAATTGCTGCAAACGCACAGACACAGAGAAAGAGAAAGAGAGATAGAGGAGAGAGAGAGAAAGATGATGGCGTTGG
CTCTTCGCAGACTCTCATCTTCCCTTAAGAAACCCATATTCTCTAATGGCCGTTTTATGTCTTCTTTGTCAACCTCGACTATGGCG
GAGTCGGAGAGATCTCGTTCCAGTTGGGTAAAGCAGCTGAATGCACCTCTGGAAGAAGTCGATCCAGAGATCGCTGATATCATCGA
ACTCGAGAAGGCTAGGCAATGGAAGGGGTTTGAACTTATACCGTCAGAGAACTTCACCTCTGCCTCGGTGATGGAAGCTGTTGGTT
CTGTTATGACTAACAAGTACAGTGAAGGATACCCTGGTGCCAGATACTACGGAGGAAACGAGTACATTGACATGGCTGAGTCATTA
TGTCAAAAGCGCGCACTAGAAGCTTTTCACTTGGATCCTTCCAAATGGGGAGTCAATGTGCAGTCTTTATCAGGATCACCAGCTAA
CTTCCAAGTTTACACCGCACTACTGAAACCTCATGAAAGAATAATGGCTCCTGACTTGCCTCATGGTGGACATCTTTCTCATGGTT
ATCAGACTGACACGAAGAAAATATCTGCTGTATCCATCTTCTTTGAGACAATGCCATACAGATTGGATGAGAGCACTGGCTACATT
GATTACGACCAGCTAGAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872234 hypothetical protein ARALYDRAFT_489509 [Arabidopsis lyrata subsp. lyrata] | 996 | 4e-106 |
| NP_851081 serine hydroxymethyltransferase 2 [Arabidopsis thaliana] | 990 | 2e-105 |
| AAK59622 putative glycine hydroxymethyltransferase [Arabidopsis thaliana] | 990 | 2e-105 |
| NP_851080 serine hydroxymethyltransferase 2 [Arabidopsis thaliana] | 990 | 2e-105 |
| XP_002527346 serine hydroxymethyltransferase, putative [Ricinus communis] | 929 | 2e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZJ5 Serine hydroxymethyltransferase, mitochondrial | 925 | 3e-099 |
| P50433 Serine hydroxymethyltransferase, mitochondrial | 905 | 7e-097 |
| P49357 Serine hydroxymethyltransferase 1, mitochondrial | 896 | 8e-096 |
| P34899 Serine hydroxymethyltransferase, mitochondrial | 893 | 2e-095 |
| P49358 Serine hydroxymethyltransferase 2, mitochondrial | 865 | 3e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E923 Serine hydroxymethyltransferase | 990 | 1e-105 |
| Q8GRI1 Serine hydroxymethyltransferase | 990 | 1e-105 |
| Q94C74 Serine hydroxymethyltransferase | 990 | 1e-105 |
| B9SMX7 Serine hydroxymethyltransferase | 929 | 2e-098 |
| B9GN69 Serine hydroxymethyltransferase | 925 | 5e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G26780.1 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 990 | 9e-108 |
| AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 990 | 9e-108 |
| AT5G26780.2 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 990 | 9e-108 |
| AT4G37930.1 SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | 925 | 3e-100 |
| AT4G32520.1 SHM3 (SERINE HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 619 | 1e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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