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Information for unigene UN66810
| FASTA Sequence |
| Unigene ID: UN66810 | Length: 763 |
SSR | | GGGACACACCCCAGGCCCCACGGTGGTAAAGGAGGTGCAGGGACAACATGCCATACTGAGAAACTGCATCGAACAGCTAAGTGTAG
TGGAGACATCCAGAACAAGTCTTATCTCTCATTTAAGAGAAGCTTTACAAGAACAGGAACTCAAGCTGGAGCAAGTCCGTAACCAC
CTTCAGATTGCTCGGTTTCAATCAGACCGAACTGGTGATCTCTGCAAACAGCTTCTAGACCATGGTAGTAGTTCACAGCCACCAGC
TACAGAAGAAGAAGCCATCAAAGTCTCACCGGCTGTATCAGCACCACAAAGCTTCACACACATCGATGTGGAACAATCTGCTCCGC
TCATGTTTGCCTCGAACCCACCAACTCAATCAGCAGTAGACCCGAGAAAAACCGCAGCCGCCGCAGTGGTAGCTAGGCTAACCGCA
TCAACCTCCTCAGCGGAAATGCTCTCCCACGTTCTCTCCTCCTTAGCCTCGGAAGGCATCATCGGAAACAACCCACCTGCTGTAAC
AGGAACTCCATCATCCGACGAGTACCCGCCAGAGAAAAGGCCCAAGCTTCAAAACCATGACCAGTCCTATCTCCAGCAGCTGCAAC
AACAACAACAGAACGCTGCAACAACATCCACAGCCACCACCAGTCCTCTACTGCTTCCGCCTCCACCACCACCACCATACCAGCTT
CAACCTCAGTACTTGCAGCCGTTACAGCCTCCTGGTCCTGTAACCAGACACCGTTCAACTACACTATAGCAACCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB01080 unnamed protein product [Arabidopsis thaliana] | 948 | 2e-100 |
| NP_189335 ENTH/VHS family protein [Arabidopsis thaliana] | 948 | 2e-100 |
| XP_002875349 hypothetical protein ARALYDRAFT_484483 [Arabidopsis lyrata subsp. lyrata] | 946 | 3e-100 |
| CBI21316 unnamed protein product [Vitis vinifera] | 518 | 1e-050 |
| CAN71473 hypothetical protein VITISV_038615 [Vitis vinifera] | 490 | 2e-047 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q66GK1 At3g26990 | 948 | 1e-100 |
| Q9LSD7 Genomic DNA, chromosome 3, P1 clone: MOJ10 | 948 | 1e-100 |
| A5AMX5 Putative uncharacterized protein | 511 | 6e-050 |
| B9RH35 Putative uncharacterized protein | 484 | 8e-047 |
| B9GF66 Predicted protein (Fragment) | 455 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G26990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81; Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). | 948 | 8e-103 |
| AT5G65180.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241 proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575; Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092 (source: NCBI BLink). | 170 | 1e-012 |
| AT5G65180.2 unknown protein | 170 | 1e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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