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Information for unigene UN66868
| FASTA Sequence |
| Unigene ID: UN66868 | Length: 703 |
SSR | | GGGCTGTAAACACACAGAGAGAGGGAGAGAGGGAGGGAGAGAGAGAGAGAGAGATCTAAGAAGAGTGAGAGTCCCCTTTATTGTGA
TTCGGAAGTTGAGATCGAGAGCTCTGTGTTGGTTGGTTCGCGTGAGATGAGTTGTTAAGAAGAAAGAAAGAAAGATGAGTAAAGAG
GCCTCGTTTTTGGTACGGCAGCCCAGGTGCCTTGTTCTCATCGTTGCCCTCACGATTCTCCTCTTCTTCGCGCTCTCACACACCCG
ACGTAAACTAAATGTATGTGTGAGAAGGACCAGCAAAATGGTATATGACTAACCACTATATGATCCCTCTTGGTATGCCTTTGGAG
GAGGAGCAGAAGCAAGTCATCGAGGAGGATTACCAAGTTACATACAGAGTATTCTTCGATATTGATGTCGACGGCCAGCGCTTAGG
CAGGATCGTTATTGGATTATACGTCACTCTTGTACCCAAAACCGTAGAAAACTTCAGGGCTTTATGCACAGGAGAGAAGGGAAAAG
CTTCTAGTGGAAAGCCTCTACATTACAAAGGAACACAGTTTCACCGTATAGTATCTGGATTCGTAGTCCAAGGAGGAGACGTAATC
CACGGTGATGGTAAAGGGAGTGAATCAATCTATGGTGGTACCTTTCTTGACGAAAATTTCAAAGTTAAGCATTCACATGCAGTGTT
GTAGCGATGGGTAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 510 | 9e-050 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 504 | 5e-049 |
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 502 | 8e-049 |
| ACU20886 unknown [Glycine max] | 452 | 5e-043 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 451 | 6e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 378 | 9e-036 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 369 | 1e-034 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 363 | 5e-034 |
| P0C1I8 Peptidyl-prolyl cis-trans isomerase cyp6 | 341 | 2e-031 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 335 | 9e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 510 | 7e-050 |
| O49605 Peptidyl-prolyl cis-trans isomerase | 502 | 6e-049 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 452 | 3e-043 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 451 | 5e-043 |
| C6TBD7 Peptidyl-prolyl cis-trans isomerase | 448 | 1e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 502 | 4e-051 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 378 | 8e-037 |
| AT2G29960.2 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 378 | 8e-037 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 364 | 4e-035 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 363 | 5e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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