Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN66923

FASTA Sequence
Unigene ID: UN66923Length: 819 SSR 
GGAGGGTTTTACCGAGGAGCGGCCGAGAGAGAGAGAGAGAGAGAGATGGGGAAGAGCGAGAAGACGACGCTAGGGAGATCACTGGT
AAAGCACCACAACTATATGATTCAAGAATCGAAAGACAAAGGAAAGTCTTGAAAGAGCAATGGAGACAACCCGACAACTTTCAGAA
GACAGAAGATCCAGAAGTTGTGATATGTGGCAGGGACGAGCTGTTGAGCCGTTTACAGTATGAAGCTCAAGAGATTGTCAGAGCAA
GAAACTCTAGAACAGCAGTTACTGTTGAATCTCAACGTGAGAATGCTGTGGTTGGATTTGTGGGGTATCCTAACGTGGGAAAGAGT
TCAACAATCAACGCATTGGTTGGACAGAAGCGAACAGGAGTTACATCTACACCAGGGAAAACAAAGCATTTTCAGACATTGATCAT
CTCTGATGAGCTCATGCTATGTGACTGTCCTGGTTTAGTCTTCCCTTCGTTCTCAAGCTCCAGATACGAGATGATCACATGCGGTG
TACTTCCTATCGACAGGATGACAGAGCACCGTGAAGCTATTCAGGTGGTGGTTGACAAGGTCCCTCGCCATGATCGAGAGTGTTTA
CAACATCTCTCTTCCCAAACCCAAAACTTACGAGCGTCAGTCCCGTCCGCCTTTCGCTGCAGAGGTTCTTAGAGCTTACTGTGCTT
CTCGTGGCTACGTTGCCTCTAGTGGACTACCTGATGAAACCAAAGCAGCGAGGCAGATTCTGAAGATACTTGGGAGTAGCTGCCGC
ATTTGCATGCCGCCTGGGATGACTGTAGAGGACACTAGTCAGGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889691 GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]7019e-072
NP_172317 P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana]6812e-069
XP_002879073 GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]6158e-062
NP_180288 P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana]5961e-059
CBI24436 unnamed protein product [Vitis vinifera]4662e-044

Swiss-Prot top hits (Blast detail)Scoree value
P53145 Large subunit GTPase 13313e-030
Q9W590 Large subunit GTPase 1 homolog3134e-028
Q2YDM7 Large subunit GTPase 1 homolog3082e-027
Q5ZJD3 Large subunit GTPase 1 homolog3044e-027
Q9H089 Large subunit GTPase 1 homolog3036e-027

TrEMBL top hits (Blast detail)Scoree value
Q9SJF1 At1g084106811e-069
Q9SHS8 At2g272005969e-060
Q0WQT0 Putative uncharacterized protein At1g084105403e-053
C9DR51 GTP-binding protein (Fragment)4534e-043
A2ZMT3 Putative uncharacterized protein4525e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G08410.1 GTP-binding family protein6818e-072
AT2G27200.1 GTP-binding family protein5966e-062
AT1G52980.1 GTP-binding family protein1655e-012
AT3G07050.1 GTP-binding family protein1298e-008
AT5G11480.1 GTP binding1191e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members