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Information for unigene UN67125
| FASTA Sequence |
| Unigene ID: UN67125 | Length: 626 |
SSR | | GATTACTTCCGACAATTCTAGTTCTTCTCTCTCTGTCTCTCCCTGTCTCTCTCTCTCCTCAAGAACCCTAATAGTTTCTCGTATTC
AACGATCTGAGTCTCTCTCTTTCCTTAAAAATCTTCCGACATGGTTTAGAGTCTCTGCTCTTAACGGAAGCTGACGTGTCAATCGT
CTGAAAAGAAAAAAAAAAATCCCTTTTATCGCGATCAGATTTTCCCCAGCAAAGATTAAAACTTTTTTTTTTCCACCGTTTGTTTC
AATCTGCGAATGAAGAAGACAATGATGAATCGTGCTCTGGTGCTTCTTCTCCTACTCTTCCTCCACGTCTTCACCCTTTCTTCAGC
CAAACTCATTCTCATCAGGAACAACATCACCCGCTCTTTTGACGACATCGAAGCTAACTTCGCTCCATCTGTTAAGGCAGCTGGTG
AAATTGGGTTGCTCTATGTGGCTGAGCCTCTTGACGCTTGCTCTAACTTGATGAATAAGCCAGAACAGAGCTCTAACGGTACTACT
TCCCCTTTCGTGTTGATCGTTAGAGGAGGTTGTAGTTTCGAAGATAAAGTCAGAAAAGCACAGAGAGCTGGTTTCAAAGCTGCTAT
TATACACGACAACGAAGACCGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887404 predicted protein [Arabidopsis lyrata subsp. lyrata] | 444 | 3e-042 |
| NP_177343 protease-associated and C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] | 439 | 1e-041 |
| AAF32326 ReMembR-H2 protein JR702 [Arabidopsis thaliana] | 404 | 1e-037 |
| AAG52220 unknown protein; 70660-72219 [Arabidopsis thaliana] | 394 | 2e-036 |
| XP_002533876 zinc finger protein, putative [Ricinus communis] | 352 | 1e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0VD51 E3 ubiquitin-protein ligase RNF13 | 166 | 3e-011 |
| O43567 E3 ubiquitin-protein ligase RNF13 | 162 | 8e-011 |
| Q5RCV8 E3 ubiquitin-protein ligase RNF13 | 162 | 8e-011 |
| Q90972 E3 ubiquitin-protein ligase RNF13 | 161 | 1e-010 |
| O54965 E3 ubiquitin-protein ligase RNF13 | 158 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZ14 Putative uncharacterized protein At1g71980 | 439 | 9e-042 |
| Q9M621 ReMembR-H2 protein JR702 (Fragment) | 404 | 1e-037 |
| Q9C8W4 Putative uncharacterized protein F17M19.13 | 394 | 1e-036 |
| B9T6K7 Zinc finger protein, putative | 352 | 1e-031 |
| B9IQI2 Predicted protein | 351 | 1e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G71980.1 protease-associated zinc finger (C3HC4-type RING finger) family protein | 439 | 6e-044 |
| AT1G22670.1 protease-associated zinc finger (C3HC4-type RING finger) family protein | 336 | 5e-032 |
| AT4G09560.1 peptidase/ protein binding / zinc ion binding | 304 | 3e-028 |
| AT1G35630.1 protease-associated zinc finger (C3HC4-type RING finger) family protein | 282 | 1e-025 |
| AT5G66160.2 JR700; peptidase/ protein binding / zinc ion binding | 202 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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