Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN67190

FASTA Sequence
Unigene ID: UN67190Length: 474 SSR 
ATAGTTTATCATGGATACATCATAACAAGCTGAAAAATAACGGAAAGACACTTTATTTATTTATTTATTTATTTATTTATTTTTAT
TTTTTTGTGTCTGAAAAACACTTTATTTAGTGAAACCATATAGTATAAAATCAAGAACTCTTCGCAGCTTGCTTGTTGAAACATCT
TACCCTTTGATGGCCTTAACATTTGGGATCACAGGCCTCACGTAAAAACCAATAGATTTCAACTGACCATGTTCAACAGTTCCAAA
AAAACCTCCAAACTCACGGCGCTCAAGTATCCCTGAATGAAACTCCATCTTCTTAAAAACAAATTCTCCTGGATCGACTGTCCAGT
GAACCGCATAGTGAGTACGTTCATTTGTATGAAACGCCAGCGAGGAAATGTAACCATTGTATACCTCCCCGTGAATCCCAGTCACA
AACTCTGTCTCATGATTCAGCCTCAAAATTCCCCTGCTACAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881925 hypothetical protein ARALYDRAFT_903775 [Arabidopsis lyrata subsp. lyrata]2253e-017
XP_002881924 hypothetical protein ARALYDRAFT_903774 [Arabidopsis lyrata subsp. lyrata]1625e-010
NP_181901 jacalin-like lectin domain-containing protein [Arabidopsis thaliana]1331e-006
AAO37189 hypothetical protein [Arabidopsis thaliana]1331e-006
AAB64033 hypothetical protein [Arabidopsis thaliana]1293e-006

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84X07 Putative uncharacterized protein At2g43730/F18O19.161338e-007
O22830 Putative uncharacterized protein At2g437301292e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G43730.1 lectin-related1356e-009
AT2G43740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: lectin-related (TAIR:AT2G43730.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1232e-007
AT2G43740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: lectin-related (TAIR:AT2G43730.1); Has 18 Blast hits to 18 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1222e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members