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Information for unigene UN67415
| FASTA Sequence |
| Unigene ID: UN67415 | Length: 646 |
SSR | | GCATCCATGGTGATGATAGAGCTTCTGAATCTCGTTCTTGACCTTAGCATCCCCATTGGGTAACAAGACACTTTGAGATTGCGCCT
GCCGTTTCGCTTCAGCCGCAGAAGCAGCACGGATCTCTCTATACTTATCAACTTCATCAGGGAAAGTCTCTTCAAGCTCCTCCAGA
ATATGTTTTCTCAAATCCTTTTGTAACTTGATGCAGCTATTAATAACATCCCTTGCTTGTAAACTCGTCCGGGTTCTTTCCATCGT
CAATCAAACAAAGAACTTCCATGGGGACTTGAATGTTGCATTTCTCGGACAACTTAGCCATGCTATTCAGCTCCGACACGAGAGAG
TTGAGGCTGAAAAGGCAGGTGTGAAAGAAGAAACAGTAAGGCGTAACTGATGAAGGAGTCCCAAAGTCTTCTGAATAGAGTTTATG
AATTGGTTCAGATTCTCCTTTAAATCTTCAGACGTAGTTGCAGTTCCATCATTTGTTTGATACCCCCATCGTTGCTTCCACCAATC
CCTGCTGCGCTTGCGTTCTGTGCTGGATGGATCCATCACAGCCTAGATATGTATCAGAGATGGGTTTGACGAAAAGACGGAGAGAG
AGAGACATGTAGTGACTCCGAGGCAGTAAGGTTGGCTTCAACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564254 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 227 | 5e-017 |
| NP_973916 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 216 | 9e-016 |
| XP_002868569 hypothetical protein ARALYDRAFT_493793 [Arabidopsis lyrata subsp. lyrata] | 207 | 1e-014 |
| NP_199006 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 204 | 2e-014 |
| XP_002303692 predicted protein [Populus trichocarpa] | 201 | 5e-014 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q93WN1 At1g26660/T24P13_4 | 227 | 4e-017 |
| Q3ED58 Putative uncharacterized protein At1g26665.2 | 216 | 7e-016 |
| Q9FHZ2 Genomic DNA, chromosome 5, P1 clone:MJC20 | 204 | 2e-014 |
| B9GY35 Predicted protein | 201 | 4e-014 |
| B9GK75 Predicted protein | 198 | 8e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26665.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 229 | 1e-019 |
| AT1G26665.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 218 | 3e-018 |
| AT5G41910.1 RNA polymerase II mediator complex protein-related | 206 | 6e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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