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Information for unigene UN67592
| FASTA Sequence |
| Unigene ID: UN67592 | Length: 558 |
SSR | | GGGTGTTTTAGCCTTCTTATCAATAAATTAGGGTTACGTCGCGAATCACGTTCAGATCTCATCTTCTCCGCTCTCTCTCTCTGAAA
AAGATGTCAGAAGAGGTGGAGTACCGCTGCTTGGTGGCCTTGCGTGGTCAACGTCTGATCGTGGTCTCAGAGATGCCTTTGAGAAG
TATGGTCACCTCCTTGAGGCCAAGGTGGTGCTTGACAAGTTTTCTGGCCGTTCCCGTGGTTTTGGGTTCATCACTTTTGATGAGAA
GAAAGCTATGGACGAAGCTATTGCTGCAATGAATGGGATGGATTTGGATGGGCGGACTATTACTGTTGATAAAGCTCAGCCGCTTC
AGGGTGGGTCAGGCAGGGATCATGATGGTGGTGACCGCAGCCGTGATCGCGGGTATGACCGTGACCGTAGCCGTCCCTCTGGTGGG
CGAGGAGGTTCAGGTGGTGGAGATTGCTTTAAATGTGGCAAGCCTAGACATTTTGCAAGGGAGTGTCCTGATGAATCCGGTAGAGG
TGGTGGGGGAAGGTACAGCTCGAGGGATGATAGGTACGGTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ34585 unnamed protein product [Thellungiella halophila] | 709 | 4e-073 |
| XP_002875318 predicted protein [Arabidopsis lyrata subsp. lyrata] | 703 | 2e-072 |
| NP_189273 RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] | 682 | 6e-070 |
| AAL09710 AT3g26420/F20C19_14 [Arabidopsis thaliana] | 623 | 4e-063 |
| XP_002523766 dc50, putative [Ricinus communis] | 582 | 2e-058 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q03250 Glycine-rich RNA-binding protein 7 | 288 | 2e-025 |
| P49310 Glycine-rich RNA-binding protein GRP1A | 287 | 2e-025 |
| Q05966 Glycine-rich RNA-binding protein 10 | 285 | 3e-025 |
| Q03251 Glycine-rich RNA-binding protein 8 | 282 | 8e-025 |
| P49311 Glycine-rich RNA-binding protein GRP2A | 280 | 1e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LIN3 AT3g26420/F20C19_14 | 682 | 4e-070 |
| Q93ZK4 AT3g26420/F20C19_14 | 623 | 3e-063 |
| B9SCP7 Dc50, putative | 582 | 2e-058 |
| C6T2P6 Putative uncharacterized protein | 555 | 2e-055 |
| C6TJJ8 Putative uncharacterized protein | 553 | 4e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G26420.1 ATRZ-1A; RNA binding / nucleotide binding | 682 | 3e-072 |
| AT5G04280.1 glycine-rich RNA-binding protein | 318 | 5e-030 |
| AT2G21660.2 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding | 291 | 7e-027 |
| AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding | 288 | 2e-026 |
| AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding | 282 | 8e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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