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Information for unigene UN67600
| FASTA Sequence |
| Unigene ID: UN67600 | Length: 604 |
SSR | | AGAGAGTAGAGGAGGATCCAGAGATAGAGAGAGGGACAGGAGAGATAGGGAGAAGAGCCGAGACGGAGACAGAGAGAGGAGTAGCA
AAGAGAGAGACAGGGGCGATAGGGAGAGGAGTAGCAAAGAGAGAGACAGGAGCGATAGGGAGAAGAGCAGAGACAGAGAGAGGAGA
GAGAGGGAGAAGGAGAGAGAGAGAAGGGAGAGGAGGAGTAGCAGTAGGTCAAGGAGGGAAGAGAGGGAACGCGAAGTAGTTGAAAG
AGGAAGCAGGAGACACAAGGACAAGAAAGATGAGCCTGAAGCTGATCCAGAGAGGGATCAGAGAACTGTCTTTGCATATCAGATGC
CTCTTAAAGCTACCGAGAGGGATGTTTATGAGTTCTTCTCCAAAGCTGGCAAGGTCAGGGATGTGCGGTTGATCATGGACAGAAAC
TCAAGACGGTCAAAGGGAGTCGGATGCACTATCAATGCGATAATGATGAGGATGATGGCAATACCTTGAACTCTTGTTTAATCAAT
TCTGCATGCTCGAGGCCTCCAACCCACCAAAAGAGACTCAGCTTGAACTCTCGCACTAAAGTTTTTTGTTCCCAACTTCTCTTTGC
TC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB09409 splicing factor-like protein [Arabidopsis thaliana] | 578 | 8e-058 |
| AAO30095 splicing factor-like protein [Arabidopsis thaliana] | 578 | 8e-058 |
| NP_568220 RNA-binding protein 39 [Arabidopsis thaliana] | 578 | 8e-058 |
| XP_002873428 predicted protein [Arabidopsis lyrata subsp. lyrata] | 578 | 8e-058 |
| BAH57172 AT5G09880 [Arabidopsis thaliana] | 505 | 2e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q86U06 Probable RNA-binding protein 23 | 220 | 1e-017 |
| Q14498 RNA-binding protein 39 | 212 | 1e-016 |
| Q5RC80 RNA-binding protein 39 | 212 | 1e-016 |
| P49756 RNA-binding protein 25 | 209 | 3e-016 |
| Q8VH51 RNA-binding protein 39 | 209 | 3e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84WH4 Splicing factor-like protein | 578 | 6e-058 |
| Q93Y25 Splicing factor-like protein | 578 | 6e-058 |
| Q9FIB8 Splicing factor-like protein | 578 | 6e-058 |
| C0Z393 AT5G09880 protein | 505 | 2e-049 |
| B7FLL5 Putative uncharacterized protein | 470 | 2e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G09880.1 RNA recognition motif (RRM)-containing protein | 578 | 4e-060 |
| AT2G16940.1 RNA recognition motif (RRM)-containing protein | 395 | 7e-039 |
| AT1G20920.1 DEAD box RNA helicase, putative | 192 | 2e-015 |
| AT2G33730.1 DEAD box RNA helicase, putative | 179 | 8e-014 |
| AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative | 167 | 2e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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