Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN67838

FASTA Sequence
Unigene ID: UN67838Length: 633 SSR 
ATACAAGTGGAAGAAGAACAACAGCTGTTCTTTCTTCCGACCACAGAGTCAGCCGACAGTTAAAATTTCAATCCTATAAATTTCAA
CTTTTCTTCTCCATTTTCAAAAATCAAATCTTTTCTTTCCTGACTCGAATGCTCTTTTTAAAATCAGATCTACTACCAGTCATCTG
AGAGATACACATTACAAACACCAAGAAGAAGAAGAAGAGGGCTACGAAGAGCTAGATCTGCTCTGTTTGTTCCTCTGTCCTAAACA
GAGAAGTCAATTAAACGTCTTTTTGAGCAAAATCAACTCTCTCTTTGTCAAATCGGAGAAATGGCCGGAGGTTTCGTAAGTCAAAC
GCCGGGGGTTCGTAATTATAATTACAAACTGACACCGAAAGTGTTCGTAACATGTTTCATCGGTGCCTTTGGTGGTCTCATCTTCG
GATACGATCTCGGAATCTCAGGAGGGGTAACCCAAATGAAGCCGTTCTTGGAGAAGTTTTTCCCTGACGTGCGCAAGAAGATGCAG
AGCGCACACCAGGACGAGTACTGTCGTTTCGATAGTCAGCTTCTCACTCTCTTCACTTCGTCTCTCTACCTAGCAGCTTTGGTCTC
TTCCTTATTCGCGTCCACCATAACCCGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883211 hypothetical protein ARALYDRAFT_898390 [Arabidopsis lyrata subsp. lyrata]4982e-048
NP_188627 sugar transport protein 4 [Arabidopsis thaliana]4963e-048
NP_001105681 monosaccharide transporter1 [Zea mays]3387e-030
ACN34678 unknown [Zea mays]3387e-030
XP_002489031 hypothetical protein SORBIDRAFT_0391s002020 [Sorghum bicolor]3387e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q39228 Sugar transport protein 44962e-049
P23586 Sugar transport protein 13081e-027
Q9FMX3 Sugar transport protein 113043e-027
Q9LT15 Sugar transport protein 102991e-026
Q9SX48 Sugar transport protein 92962e-026

TrEMBL top hits (Blast detail)Scoree value
C0PHL2 Putative uncharacterized protein3385e-030
C6JSD2 Putative uncharacterized protein Sb0391s002020 (Fragment)3385e-030
Q6B4G9 Monosaccharide transport protein 13385e-030
A9NV13 Putative uncharacterized protein3223e-028
C5Y9P7 Putative uncharacterized protein Sb06g0185403035e-026

Arabidopsis top hits (Blast detail)Scoree value
AT3G19930.1 STP4 (SUGAR TRANSPORTER 4); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter4961e-050
AT1G11260.1 STP1 (SUGAR TRANSPORTER 1); carbohydrate transmembrane transporter/ sugar:hydrogen symporter3089e-029
AT5G23270.1 STP11 (SUGAR TRANSPORTER 11); carbohydrate transmembrane transporter/ sugar:hydrogen symporter3043e-028
AT3G19940.1 sugar transporter, putative2991e-027
AT1G50310.1 STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar:hydrogen symporter2962e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members