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Information for unigene UN67862
| FASTA Sequence |
| Unigene ID: UN67862 | Length: 643 |
SSR | | GGGAGAGAGAGAGAGAGGTCTAGCAAAAATGGCGATGGCCATGGCTCTTCGAAGACTTTCTTCTTCAGTTGACAAACCCATTCGTC
CCCTTATCAGATCAACTTCATGCTTCATGTCATCTCTGCCTAGTGAAGCTGTGGATGACAAGGAGAGATCTCGTGTCACTTGGCCA
AAACAGCTTAACGCATCATTGGAGGAGGTTGATCCTGAGATTGCTGACATCATTGAGCTTGAGAAAGCTAGACAATGGAAGGGACT
TGAACTCATTCCATCTGAGAATTTCACATCTGTCTCGGTGATGCAAGCTGTTGGCTCTGTGATGACTAACAAGTACAGTGAAGGGT
ACCCTGGCGCTAGATACTATGGAGGAAACGAGTACATAGACATGGCTGAAACTTTATGCCAAAAGCGTGCTCTTGAAGCTTTCCGG
TTAGACCCTGAAAAGTGGGGAGTGAATGTTCAACCTCTGTCTGGATCTCCTGCTAACTTCCATGTCTACACTGCATTGCTAAAGCC
TCATGGTTATCAGACTGACACCAAGAAGATATCTGCTGTGTCTATCTTCTTTGAAACAATGCCTTATCGATTGGATGAGAGCACTG
GCTACATAGACTATGATCAGATGGAGAAAAGTGCTACTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195506 glycine hydroxymethyltransferase [Arabidopsis thaliana] | 827 | 1e-086 |
| AAL06913 AT4g37930/F20D10_50 [Arabidopsis thaliana] | 827 | 1e-086 |
| XP_002866922 hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata] | 827 | 1e-086 |
| BAJ33788 unnamed protein product [Thellungiella halophila] | 816 | 2e-085 |
| ACM45955 serine hydroxymethyltransferase 5 [Glycine max] | 756 | 2e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZJ5 Serine hydroxymethyltransferase, mitochondrial | 827 | 7e-088 |
| P49357 Serine hydroxymethyltransferase 1, mitochondrial | 721 | 1e-075 |
| P50433 Serine hydroxymethyltransferase, mitochondrial | 719 | 2e-075 |
| P34899 Serine hydroxymethyltransferase, mitochondrial | 718 | 3e-075 |
| P49358 Serine hydroxymethyltransferase 2, mitochondrial | 686 | 1e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6ZJZ0 Serine hydroxymethyltransferase | 756 | 2e-078 |
| B9SMK7 Serine hydroxymethyltransferase | 751 | 6e-078 |
| A9YWS0 Serine hydroxymethyltransferase | 740 | 1e-076 |
| B7FLU1 Putative uncharacterized protein | 740 | 1e-076 |
| A9PIN8 Serine hydroxymethyltransferase | 709 | 5e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37930.1 SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | 827 | 6e-089 |
| AT5G26780.1 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 666 | 3e-070 |
| AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 666 | 3e-070 |
| AT5G26780.2 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 666 | 3e-070 |
| AT4G32520.1 SHM3 (SERINE HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 435 | 2e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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