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Information for unigene UN67942

FASTA Sequence
Unigene ID: UN67942Length: 795 SSR 
GGGCGGGTGCGAGTGATTAATTTCGATCCTTCCATAGAAAGATAAAAGAGAGAGAGAGAAAAGCTTGAAACTTTGACGATTTCGAC
ATCTAAAGGATTGTAATTGACCGCAAGAAAAAGATTCCTCCCTCTCCTTCCCTCGGCTCATCAAAGCAAGAATCTTTCATTCATGA
CGACCAATTTCGATGACTCTTCAAAGCAACTCGTCTTGCTTGCATCTGTTTGTTCCGGCATCCTCATGTGCAAAATCGTTTATGAC
TTGACTGGTTTCATAAGTCCTTTACTCTTCAGTACTTATGGGAAACTCGACGGCAAAGTTAGAATGGAATGGAACAACAGGGGATT
CTCAACGTTCCATGCTGTTTTTGTTTCTGTGGCATCAATCTATCTCCTGGTGATCTCAGATCAGTTTGATGAGAGTGTTCATGGTG
ATTCAGTCATCAATAGTACAACGAGGTTGTCTGAATCTGTAATGGGGATCTCCTTAGGCTATTTTGTAGCGGACTTAATGATGATC
TTTTGGCATTTTCCTACTCTTGGTGGTGTTGAATATGTTTTCCATCACTGCTTATCGATGTTCTCCATCATTCTTTCTGTCACAAG
TGGACAAGCACAGTTCTACATATTCATGGTTCTCTTATCGGAGCCACTACCCCGTTTGTCAACCTACGTGGTACTTGGATGCTAGT
GGTCAAAAAGCTCTAAGCTTACACACTCATGGGATGCCCTGTTCTTGGGTTGCTGGTCGCGAGGATCTTTTGTTATCTACTTCTTT
GTACACATGTACTCCATTTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567355 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana]7431e-076
BAJ33804 unnamed protein product [Thellungiella halophila]7412e-076
AAM61723 unknown [Arabidopsis thaliana]7376e-076
XP_002872510 hypothetical protein ARALYDRAFT_911336 [Arabidopsis lyrata subsp. lyrata]7367e-076
CAB39789 hypothetical protein [Arabidopsis thaliana]5915e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q5XIY2 Transmembrane protein 56-B1485e-009

TrEMBL top hits (Blast detail)Scoree value
Q93ZA9 AT4G10360 protein7438e-077
Q8LEX4 Putative uncharacterized protein7374e-076
Q9SV86 Putative uncharacterized protein AT4g103605913e-059
B9IQX6 Predicted protein5019e-049
B9SK69 Putative uncharacterized protein4946e-048

Arabidopsis top hits (Blast detail)Scoree value
AT4G10360.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97; Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink).7435e-079
AT4G10360.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97; Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink).7435e-079
AT1G31300.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98; Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).3861e-037
AT1G31300.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98; Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).3861e-037
AT4G19645.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102; Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).3582e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members