Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN68000

FASTA Sequence
Unigene ID: UN68000Length: 637 SSR 
GGAAGATCTAATTTGATCCACTTTCATTCATTCTCTCTCTCTCTCTTGCTCGCGGTGATCTCCCTCTCGCCAAACTCTTGATGATA
GATATCACACTATTGGAATCAGACAGGAGACAAAAAAAAATGGGTGGTGGTGAGGCAGAAGAGATCAAGGAACGTTTACAACCAAC
AAAGGAGAAGAAGAAACAACAACAACAGAAAAACGTGAAAGGGAAGAGACTATGGCAGAAAGTCAAGTACCAACTCGTGGAGTACC
ACGCTTTGCCTGCTTACCTCAGAGACAACGAGTACATCTTGGGCCACTACCGTTCCGAATGGCCCCTCAAACACATCCTCCTCAGC
ATCTTCTCCATCCACAACGAGACCTTGAATGTCTGGACGCACTTGATTGGTTTTTTCTTGTTTCTAGCACTTACTATATACACAGC
TACTAAAGTCCCAAGCGTTGTGGATCTTCAGCACCGTTTACCTCATCTCCTCAGGAAAACTGATCTTCACAAACTTCACTCTGACC
TCATGTCTCGCCTTCCTTCTTCTCCTTCTAAGTGGCATCTCATGGAGCTTCTCTATAACTGTCTCCCTGACAGATTCTCTCATGCC
AACTCCACTGACATGTGTGTCCTGCATTCAGTGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868976 hypothetical protein ARALYDRAFT_490848 [Arabidopsis lyrata subsp. lyrata]7437e-077
NP_195483 heptahelical protein 4 [Arabidopsis thaliana]7293e-075
NP_195545 heptahelical protein 5 [Arabidopsis thaliana]7293e-075
BAD43945 putative protein [Arabidopsis thaliana]7267e-075
BAJ34118 unnamed protein product [Thellungiella halophila]7177e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q6TCH7 Progestin and adipoQ receptor family member 31636e-011
Q6TCG8 Progestin and adipoQ receptor family member 31636e-011
Q96A54 Adiponectin receptor protein 11592e-010
Q91VH1 Adiponectin receptor protein 11592e-010
Q86V24 Adiponectin receptor protein 21351e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SVF3 Putative uncharacterized protein AT4g383207372e-076
Q9SZG0 Putative uncharacterized protein AT4g376807372e-076
Q67ZB8 Putative uncharacterized protein At4g383207345e-076
C6T8W3 Putative uncharacterized protein5151e-050
A6MH02 Hemolysin III-related family protein (Fragment)4603e-044

Arabidopsis top hits (Blast detail)Scoree value
AT4G37680.1 HHP4 (heptahelical protein 4); receptor7372e-078
AT4G38320.1 HHP5 (heptahelical protein 5); receptor7372e-078
AT5G20270.1 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1); receptor2318e-020
AT2G24150.1 HHP3 (heptahelical protein 3); receptor2041e-016
AT4G30850.1 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2); receptor1994e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members