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Information for unigene UN68086
| FASTA Sequence |
| Unigene ID: UN68086 | Length: 815 |
SSR | | CGACCTGAATCTACTTCTCGTAAAAATAAACAATGACAAAGAAAGTAGTTGCTCGTCAAAGATTCAGACAATTGAGACGGTTAAAA
AGAAAAACCATAAAAAGCGGGCACCACTTGACTACAATGCACACATTACAACAGTGGAAGCTCTTTTTTTCTTTTAACCTTTAAAG
GCTAAAAGCTAAACACAATCTCAAAGACGGTAAAGCTTGACATTTCAACCGTGGAAATTTCACCATTATTATTATCACCTCTCAGA
ACTAATGCTCGAAGCTTTCTTATGCTTCCCACGACGTTCTTTCACATCCTTAAGCTTCTCTATCTTCACATTCTCGCTGTTTGACT
TTGACACAGATCCTTCTTGAGCACTGCACATTTGATGCGACTTCAGCTTTATACCAAACCATGTTTTGCTACCGCTTCCCGAACCA
CCACCACCACCACCTTTTGTCGTCTTACCAAGCTTCTCAATCTCCTGTCTCATATTGGAACACTCTTTCTCCAACTCACAAACCCT
CATTCTCATACTGTCCATTCCAACTTTCAAGACTTGATTCTCTCTTACCGCAGTTGCCCATCCTCCTCCTCCTCCTCCTTCGGTTG
ATCCTCCTGCAAATCCGCCGCTTCTTAACTGTCTTGATCCGCCATCAAGGTTGTCTGAAACCAGAAACACCCAGCTACAGAGGTCC
TGAGCTGAAGCTGCTCAAAGAAGAGGACTTGGACGATTATCCTTAGAGGTAACCTCTCGTTCTGCGCCGCGTGTGTGCAAGCTTCT
AAGAGAGCTTCTGGCAATCTAACAACCTGCAAACATTCTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890870 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata] | 665 | 1e-067 |
| BAJ34601 unnamed protein product [Thellungiella halophila] | 656 | 1e-066 |
| NP_174332 Phototropic-responsive NPH3-like protein [Arabidopsis thaliana] | 641 | 8e-065 |
| AAF19742 Contains a bZIP transcription factor PF|00170 domain. ESTs gb|R30400, gb|AA650964, gb|AI994521 come from this gene [Arabidopsis thaliana] | 641 | 8e-065 |
| ABN08065 BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] | 367 | 5e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S9Q9 BTB/POZ domain-containing protein At1g30440 | 641 | 4e-066 |
| Q9FMF5 Root phototropism protein 3 | 122 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2Q365 BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 | 367 | 3e-033 |
| A5B9R9 Putative uncharacterized protein | 367 | 3e-033 |
| B9SKU3 Root phototropism protein, putative | 347 | 7e-031 |
| B9I190 Predicted protein | 329 | 8e-029 |
| C5WR83 Putative uncharacterized protein Sb01g013680 | 324 | 3e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30440.1 phototropic-responsive NPH3 family protein | 642 | 3e-067 |
| AT5G13600.1 phototropic-responsive NPH3 family protein | 164 | 7e-012 |
| AT5G03250.1 phototropic-responsive NPH3 family protein | 161 | 2e-011 |
| AT5G66560.1 phototropic-responsive NPH3 family protein | 156 | 6e-011 |
| AT3G50840.1 phototropic-responsive NPH3 family protein | 143 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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