RadishBase

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Information for unigene UN68132

FASTA Sequence

Unigene ID: UN68132	Length: 742	SSR
GGACAAAGCAAACGACAACAATATTACAAATGCAAAAAACTATACAAGCGCCAGTCGAAAAAAAATATATTCTTAAACCCCAAATC TCTAAAAAAATTACAAAGGTTTCGGTATTCTATAAGCTCTGAAAGCCAAACCGTGCTCCCGATCCAAGCGTCTGGCTTCCATATTC TTTTTGCGAAAGTAAAAATTGCATGATGTGCCAAAAGTCTCACACACTGCATATATTAACACAAAGTATATCGAAGCACGAAAGAA AGAAAGAAAGAAATTAAAAAAAACACACTAGCAATGCCCAAACCCAAAACCCTATCAGACCAAATTCTCTACAACATCCTACGGTC GGTCATCATCACTCCTCACACTCTCCTCTTTTCTTATTCGATGCCTTTGGTCCAACGTTGCTGCCACAATGTCTTGATGACATTCG TGTTCCCTCTTTACTTTAGGCTAGTTGTATATTTTAACCGGCTTCTCATAAGTGTGTCGGTTCTGGTTTGCAGAATAAGCCCTTTT AGGAGTGGTATCAGTGTGCTCCAACCCCAGGTACTGCTCAAAAGCACCGTAGACATCTCTCCTCTGGAAGTGATTGTAAACAACAT CCGAATCCTGCAAGTACTCTGGACGCCCCATTGACATAAACGCAAACTTCCACTTGGCAAAGTCCTCATCGGATACATGAAGCTTC TTTTGGATACGGTTCTTGATTTCTTCAAGAGTTTCACCTTCATGGATTACCAAG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
BAJ34172 unnamed protein product [Thellungiella halophila]	500	2e-048
BAB11409 ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]	492	1e-047
NP_568171 ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]	492	1e-047
AAG42754 ubiquitin-specific protease 12 [Arabidopsis thaliana]	492	1e-047
NP_850783 ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]	492	1e-047

Swiss-Prot top hits (Blast detail)	Score	e value
Q9FPT1 Ubiquitin carboxyl-terminal hydrolase 12	492	6e-049
Q84WU2 Ubiquitin carboxyl-terminal hydrolase 13	442	4e-043

TrEMBL top hits (Blast detail)	Score	e value
Q56WJ6 Ubiquitin carboxyl-terminal hydrolase (Fragment)	431	1e-040
B9IIF3 Predicted protein (Fragment)	428	2e-040
B9H9P5 Predicted protein	427	3e-040
A5BSR9 Putative uncharacterized protein	423	9e-040
B9HKI3 Predicted protein	423	9e-040

Arabidopsis top hits (Blast detail)	Score	e value
AT5G06600.1 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12); ubiquitin thiolesterase/ ubiquitin-specific protease	493	4e-050
AT5G06600.2 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12); double-stranded DNA binding / ubiquitin thiolesterase/ ubiquitin-specific protease	493	4e-050
AT3G11910.1 UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13); ubiquitin thiolesterase/ ubiquitin-specific protease	443	3e-044

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	1			100%

Unigene Members