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Information for unigene UN68165

FASTA Sequence
Unigene ID: UN68165Length: 721 SSR 
CAAGATTGAGCTTAATTTATAACATTAAGAAAAAAAATTAAAGGTTCTCAGACAAAAAAAAAAACCAAAACAATAAAAAAGGATGC
AATGGATAAGTTAAAGACTTGAAAACAAAAAGAGCATTCTCTTCTACAAAGCTTCTACTCGTCGCTAAAGGTAGTCTTCTTACCAT
CTGAATGAGTGAAACTAGGTCTTCCACGACCGTTTTCTCTTCCTCTGCCACCACGACCACGGAAATTATCTCCTCCTCTGCCACGA
CCACGGCCACGACCACTGTCTCTTCCTCCGCCATAGTTGCTCCTTCCACTACTGTTGTTCTCCTTCGGTCTAGGCTCATCAACAAC
GAGGTTCCATCCTCCCATTTCACTACCATTAAGTTCAAACGCCTTCTCCGTGCCTTCCTTAAATTCAAGGTAAGCAATTCCTCTGG
AACCACCAGTTTCACGGTCAACGGGAACAGAGACCCTCGTGATCTCTCCACATGAAGCAAAGTGTTCACTCAAGGCGCTCTTGATA
TCATTCACAGGAAGGGAAGAGTCAAATCCCTTCACAAAAACCTCTGAACCACCACCACCACCGCCGTTTCCGCTTCGGGGAGTGTT
GTAAGCGGGTCTTTCACCCCTCTCCTGAGCAACATCAAGACGAAGTTCACGACCAAGCAAAGGTCTCCCGTGAAATTCAAGTGCAT
TCTGTGCTTCTCCGGCAGTTGCAAACTCAACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891463 hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp. lyrata]5663e-056
NP_175322 nucleolin [Arabidopsis thaliana]5403e-053
XP_002467108 hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]4411e-041
NP_001053909 Os04g0620700 [Oryza sativa Japonica Group]4311e-040
EAZ32021 hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]4311e-040

Swiss-Prot top hits (Blast detail)Scoree value
O14327 Polyadenylate-binding protein 21862e-013
Q44554 Putative RNA-binding protein rbpB1451e-008
Q9WX39 Putative RNA-binding protein rbpF1451e-008
O89086 Putative RNA-binding protein 31441e-008
Q925G0 Putative RNA-binding protein 31332e-007

TrEMBL top hits (Blast detail)Scoree value
Q9FVQ1 NuM1 protein, putative5591e-055
C5WZC1 Putative uncharacterized protein Sb01g0197104417e-042
A3AXI2 Putative uncharacterized protein4311e-040
Q7XTT4 OSJNBa0058K23.21 protein4311e-040
Q01JU3 H0714H04.9 protein4255e-040

Arabidopsis top hits (Blast detail)Scoree value
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding5599e-058
AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding4021e-039
AT1G72800.1 nuM1-related2471e-021
AT5G03480.1 nucleic acid binding / nucleotide binding1654e-012
AT5G51730.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).1646e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members