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Information for unigene UN68398

FASTA Sequence
Unigene ID: UN68398Length: 729 SSR 
GGAAAACCAGAGAGAGTGAGAAAGACCCTCTGACCAAAGTCAAAACTTCTTAAACTTGGTTTCAGATCTGAAAAGGGCTTCATCGA
ACTCTCCGGCGTCGTTTCATGATCTGACTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTATCTCTTTACTTAGGTAACTGTTG
CTGACTATTCTTAACATGCCTGCCAGGCCAAGACTAAGCAAAGCTGACAACACAATCTGGTTTGAAGACGGTTCCTTTTAGTTTTC
ACTCACAAAGACCATTTCAAGTGCTCTTGTGAACATGGATTCAGCAAACAGTGAGTTCAACAAACGGGCTAGATTGTTTGAGGACC
ATGAAAACAAAGGCTCCAAGGTGATTCATTCAATGATCCCTGAATCTACCACACCCCTGAACAAAGGGTATGACGCTTCTACAACC
ACTCAAAACTTGTTCGTTGAATCAAAACCTGAAGCTACGACGCCAAAAGTCCTTAAGAAGAGAGGAAGGAAGAAGAAGAATCCTAA
CCCCGAGGAAACAATTCGTCAACTCCAGGTGGAGAGGACTCAGAGAACCGCTCAAAGTTCTACGAAAGTGCTTCTGCTAGAATGAG
AACTGCAACTGCAGAGGAAAGAGAGAGAGCCATCACTGCAGCCAAAACCTACGAACCAACCAATCCATTCTTTAGAGTTGTTCTGC
GACCATCTTATCTCTACAGAGCTGCATCATGTACTTGCCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34322 unnamed protein product [Thellungiella halophila]2903e-024
AAK68808 Unknown protein [Arabidopsis thaliana]2823e-023
NP_564547 B3 domain-containing protein REM19 [Arabidopsis thaliana]2823e-023
XP_002894192 hypothetical protein ARALYDRAFT_891847 [Arabidopsis lyrata subsp. lyrata]2823e-023
BAB01695 unnamed protein product [Arabidopsis thaliana]2681e-021

Swiss-Prot top hits (Blast detail)Scoree value
Q9XIB5 B3 domain-containing protein REM192821e-024
Q8L3W1 B3 domain-containing transcription factor VRN12685e-023

TrEMBL top hits (Blast detail)Scoree value
Q6R2U8 Reduced vernalization response 12572e-020
Q6V0J6 Reduced vernalization response 12501e-019
C6TAZ3 Putative uncharacterized protein2312e-017
B7FHT8 Putative uncharacterized protein (Fragment)2113e-015
B9NJ20 Predicted protein (Fragment)2113e-015

Arabidopsis top hits (Blast detail)Scoree value
AT1G49480.1 RTV1 (related to vernalization1 1); DNA binding / transcription factor2821e-025
AT3G18990.1 VRN1 (REDUCED VERNALIZATION RESPONSE 1); transcription repressor2685e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members