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Information for unigene UN68410
| FASTA Sequence |
| Unigene ID: UN68410 | Length: 485 |
SSR | | AAGATTCCAGAATCTAATTAAACTGTTACCAGTATTCCTTAAATAACATTTCATTGTTTAGCTTGAATCTAATCAAACTGTTAAAA
ACTCATCAACAATTACATGATTTGTTTTTGGGGTCTCCATTCTGCTGATTTCAATACACACGTTAATAACATAACAAGTGTCCGAA
AACCGAACTCTCAAACCATGACGGAGGCTTCGTCATCATCATCATCATCATCATCTGTCCCGTCGTCTTGTTCTTGCCATCCTGAG
TGCGCCTTGAATTTACAGACAGGACATGTTCCTTGCTGTCTAAGCCATGGATCGATACAGACTGCATGAAACTGATGCAAGCAAGG
TAGGGTGCGAACAACCTCCCCAACAGTAACTTGTTCGAGGCAAACACTACAAGTGAGCTCGTCTTCCGTTCCTTTTTTACTCGCAC
TGACAGAATCTTGCTTCTTCTCCGCTGAGGATGAGGTTGATGCCTGCTTTGTCAA
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002878037 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 436 | 9e-042 |
| NP_191112 E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana] | 419 | 8e-040 |
| ADN34069 protein binding protein [Cucumis melo subsp. melo] | 347 | 2e-031 |
| CBI31650 unnamed protein product [Vitis vinifera] | 333 | 8e-030 |
| XP_002531577 protein binding protein, putative [Ricinus communis] | 332 | 1e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2S6 E3 ubiquitin-protein ligase SDIR1 | 419 | 7e-041 |
| Q3U2C5 E3 ubiquitin-protein ligase RNF149 | 168 | 9e-012 |
| Q8NC42 E3 ubiquitin-protein ligase RNF149 | 167 | 1e-011 |
| Q6NRX0 E3 ubiquitin-protein ligase RNF149 | 163 | 3e-011 |
| Q68DV7 RING finger protein 43 | 160 | 8e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T008 Protein binding protein, putative | 332 | 7e-030 |
| B9HTG7 Predicted protein | 327 | 2e-029 |
| C6TKE4 Putative uncharacterized protein | 324 | 6e-029 |
| C6TGC2 Putative uncharacterized protein | 322 | 9e-029 |
| B9HPE3 Predicted protein | 307 | 5e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G55530.1 SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding | 419 | 8e-042 |
| AT1G04790.1 zinc finger (C3HC4-type RING finger) family protein | 162 | 5e-012 |
| AT3G58720.1 zinc finger (C3HC4-type RING finger) family protein | 159 | 1e-011 |
| AT1G35625.1 peptidase/ protein binding / zinc ion binding | 158 | 1e-011 |
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 156 | 2e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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