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Information for unigene UN68520

FASTA Sequence
Unigene ID: UN68520Length: 812 SSR 
GGACACACTCCTCTCTCTCTCTCTCTAGTCTCTACCCCTCAGCGACACCACCAGTCACTCGCACAGAGAAGAAGTCGAAAGATAAC
ATCAAAAAAGATTTTCAGTGTTAGTCAGAGCGATTCACAGAGAAGACTAGAGTGAGATTTCTTCATCACAGCTTCAGTTTTCCCCG
ACGGTCTGTGCTCATGAGCCGACGGCGACTTCTGTTATCGGCGACGCTACTCTCGTATTTGCTTCACGGGATGGCTCTCGTCTCCG
TCGTAGCCTCCGGCGTAGAGGGGGTTAGTAGAGATAACGTGGATTTGACCAAAACGACGACGTTAACCACCTCTCATACGCATCGG
AAGATGCTCCATCTCTCTCATGAGACGAGAGCAGAGCCGGATAGGATCGGAGAGAAGTGCAAGAAGTCTGACATTGTGGTGAACCA
AGCAGCGACCGAACCTATGCCCAACGGAATACCCGGTTACACGGTAGAGATCACGAACCAATGCATGTCTGGATGCAACATCTCGA
GGATCCACGTCAGCTGCGGTTGGTTCAGCTCCGTTAAGTTGGTTAACCCGAGAGTTTTCAAGCGGATTCACTACGACGACTGTCTC
GTCAACAACGGGAAGCCTTTGCCTTTTGGATCCACGCTCTCTTTCCACTACGCCAACACTTTCCCATATCGTCTCGCTGTCTCGTT
CGTTACCTGCTCCTGAGTCCTCCTGATCTTTTCTTTCTCATATAGATAAGATGATAGTAGAAACACGCGGGAAAATTAGATACAGG
AGTATGATTGATATTATCACATCATACCACACTCATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974612 tapetum determinant 1 [Arabidopsis thaliana]7125e-073
XP_002869695 hypothetical protein ARALYDRAFT_914087 [Arabidopsis lyrata subsp. lyrata]7001e-071
XP_002280540 PREDICTED: hypothetical protein [Vitis vinifera]4392e-041
XP_002890998 hypothetical protein ARALYDRAFT_473449 [Arabidopsis lyrata subsp. lyrata]4015e-037
XP_002318153 predicted protein [Populus trichocarpa]3926e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q6TLJ2 TPD17123e-073
B9I3W2 Predicted protein3924e-036
Q2V4J6 Putative uncharacterized protein3915e-036
B9IFG2 Predicted protein3862e-035
B9HD45 Putative uncharacterized protein (Fragment)3631e-032

Arabidopsis top hits (Blast detail)Scoree value
AT4G24972.1 TPD1 (TAPETUM DETERMINANT 1)7132e-075
AT1G32583.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: TPD1 (TAPETUM DETERMINANT 1) (TAIR:AT4G24972.1); Has 78 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3913e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members