Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN68755

FASTA Sequence
Unigene ID: UN68755Length: 621 SSR 
GGGAGAGAGAGAGAGACTCAGTACCATTTCTTCTTCCACCAATTTCTCTGACGCGCTTTCTTCTCAGCTCTCTCATCTTCACGTCC
GGCGCCATTTCGTGCGAAGAGCTAAAGGTTTTTTTTTTTTTGGAGCTCATGGACAGCTTCTGGCAATTGGGTGATGAGCTACGAGG
TCAGACTCAGTCACGAGCATCAGAGGATCACAAATGGTCCACCGTCGCAACCAAGCTCGCTGAGCAGACTAGGATGAAAAGCGAAA
GGTCGAACAACCTCGATCTCTCCAAAGCTGGTTACTCTGAGTTCAGACCAACCGACAAGCTTAGTTTCCACCACAACAACAACGAC
CTTAACTTCAATATGTTTAACAGCAGGAATGTTTACAACAACATGAATGCTGCTACTGTTTTCCAGAAGAATGATTTCTTCAAAAG
TGGAGGAGGCAACACGAAGGTTAACAAGTATAATGGTAATGTTGTTGTTGCTAACAAAGAGCTGAGCAAACACAACAACAGCAATG
ATAATGCTGTTGACAAGAGGTTTAAGACCCTGCCTGCGTCGGAGACGCTTCCAAGGAACGAAGTTCTTGGCGGGTACATCTTTGTT
TGTAACAACGATACCATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB16967 unknown [Solanum tuberosum]4085e-038
XP_002875357 hypothetical protein ARALYDRAFT_484493 [Arabidopsis lyrata subsp. lyrata]3144e-027
NP_189345 DCD (Development and Cell Death) domain protein [Arabidopsis thaliana]3002e-025
AAM64572 gda-1, putative [Arabidopsis thaliana]2992e-025
ADE77451 unknown [Picea sitchensis]2652e-021

Swiss-Prot top hits (Blast detail)Scoree value
P37707 B2 protein1691e-011

TrEMBL top hits (Blast detail)Scoree value
Q38HW1 Putative uncharacterized protein4083e-038
Q9LSC7 AT3g27090/MOJ10_183001e-025
Q8LBT1 Gda-1, putative2991e-025
D5AD32 Putative uncharacterized protein2651e-021
C6TM49 Putative uncharacterized protein2418e-019

Arabidopsis top hits (Blast detail)Scoree value
AT3G27090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).5751e-059
AT5G42050.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink).1781e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members