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Information for unigene UN68755
FASTA Sequence |
Unigene ID: UN68755 | Length: 621 |
SSR | | GGGAGAGAGAGAGAGACTCAGTACCATTTCTTCTTCCACCAATTTCTCTGACGCGCTTTCTTCTCAGCTCTCTCATCTTCACGTCC
GGCGCCATTTCGTGCGAAGAGCTAAAGGTTTTTTTTTTTTTGGAGCTCATGGACAGCTTCTGGCAATTGGGTGATGAGCTACGAGG
TCAGACTCAGTCACGAGCATCAGAGGATCACAAATGGTCCACCGTCGCAACCAAGCTCGCTGAGCAGACTAGGATGAAAAGCGAAA
GGTCGAACAACCTCGATCTCTCCAAAGCTGGTTACTCTGAGTTCAGACCAACCGACAAGCTTAGTTTCCACCACAACAACAACGAC
CTTAACTTCAATATGTTTAACAGCAGGAATGTTTACAACAACATGAATGCTGCTACTGTTTTCCAGAAGAATGATTTCTTCAAAAG
TGGAGGAGGCAACACGAAGGTTAACAAGTATAATGGTAATGTTGTTGTTGCTAACAAAGAGCTGAGCAAACACAACAACAGCAATG
ATAATGCTGTTGACAAGAGGTTTAAGACCCTGCCTGCGTCGGAGACGCTTCCAAGGAACGAAGTTCTTGGCGGGTACATCTTTGTT
TGTAACAACGATACCATGG
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GenBank top hits (Blast detail) | Score | e value |
ABB16967 unknown [Solanum tuberosum] | 408 | 5e-038 |
XP_002875357 hypothetical protein ARALYDRAFT_484493 [Arabidopsis lyrata subsp. lyrata] | 314 | 4e-027 |
NP_189345 DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] | 300 | 2e-025 |
AAM64572 gda-1, putative [Arabidopsis thaliana] | 299 | 2e-025 |
ADE77451 unknown [Picea sitchensis] | 265 | 2e-021 |
TrEMBL top hits (Blast detail) | Score | e value |
Q38HW1 Putative uncharacterized protein | 408 | 3e-038 |
Q9LSC7 AT3g27090/MOJ10_18 | 300 | 1e-025 |
Q8LBT1 Gda-1, putative | 299 | 1e-025 |
D5AD32 Putative uncharacterized protein | 265 | 1e-021 |
C6TM49 Putative uncharacterized protein | 241 | 8e-019 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G27090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). | 575 | 1e-059 |
AT5G42050.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). | 178 | 1e-013 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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