Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN68761

FASTA Sequence
Unigene ID: UN68761Length: 702 SSR 
GGGCTAAACTACACCGTCGTGAGAGAGACTTTCTCGAGAGAGAGAGAGATGGCTGAAACAGCGAGAAGACAAGGTGGTGGTGGGAG
GCTGTTTCCGCCGCCTCCTCCGAGAGGCGTTAATCAACCCCCTCGCCCTAAAGCCGAGCCTGTCGATCGCGAGAAGACGTGTCCTT
TGCTTCTTCGTGTGTTCACCAAGAGTGGTGGTCATCATACTAAGGAAGATTATGCTGTGAGAGGCAAAGAGCCAAAGGACGAAGTT
CAGATTTACACTTGGAAAGATGCCAATCTTCGCGAGCTAACAGATTTGGTCAAAGAGGTTTCTGTGGCAGCTAGGAGAAGAGATGC
TAGATTATCGTTTGCGTTTGTTTATCCAGACAAGAATGGCCGCTTTATTGTCAGACAGGTTGGTCAGACGATGTCTTATCCAAACC
GAAAACAACCAGACGACAGTAAAACACTCGCTGACCTTCATTTCGAGATTGGAGATTATCTGGATGTGGCAATCTACTAGGAGGAA
GAGGTTTCTGTTTTTTTCCTCGAGTAGCATTTAGGGGGTGTGTGCACAAGCAAAAGAACACATTCATAGTTGTTCCTATTCTTTTT
TTTTTTAACAACAGTTGTTCCCATTTCAAAACTTCGTTTGGACACATATTATGTATCCTTGGATCTGGTCTGTGCACAACTGGTTT
AGTCATAACTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882023 hypothetical protein ARALYDRAFT_904009 [Arabidopsis lyrata subsp. lyrata]6901e-070
NP_566050 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6722e-068
AAM67239 sin3 associated polypeptide p18 [Arabidopsis thaliana]6668e-068
NP_001189753 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6353e-064
XP_002277566 PREDICTED: similar to Os02g0122000 [Vitis vinifera]5611e-055

Swiss-Prot top hits (Blast detail)Scoree value
O64644 Histone deacetylase complex subunit SAP186727e-070
Q3T022 Histone deacetylase complex subunit SAP183188e-029
O00422 Histone deacetylase complex subunit SAP183188e-029
Q5RDT5 Histone deacetylase complex subunit SAP183188e-029
O55128 Histone deacetylase complex subunit SAP183171e-028

TrEMBL top hits (Blast detail)Scoree value
Q6V9I5 P185501e-054
C6T2R6 Putative uncharacterized protein5473e-054
B9RDH5 Histone deacetylase complex subunit SAP18, putative5285e-052
B9GPT2 Histone deacetylase complex protein5213e-051
A2X0A2 Putative uncharacterized protein5106e-050

Arabidopsis top hits (Blast detail)Scoree value
AT2G45640.1 SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator6781e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members