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Information for unigene UN69005

FASTA Sequence
Unigene ID: UN69005Length: 697 SSR 
CGTTAGATAACTTTTCCGATGATAGATAAAATCTTAAGACATAAGTAAAAACCAAAAACTACTTATTTGTTCACACAAGCAACTTA
GGCTCTGCCCTTTCCTTTTCCCTTGCCCTTGTTGTTGGAACCAGACTGCTTGCCAGAATTGAATTGCTTCTTGTTACCAGCGGATG
ATTGACCTGGGCCCTGGTTAAGACTCTTTCCACCCTTTTTAGCTGGGTGTGGTGTAGCTGTGTGCCCGCTCTTCTTCTTCTCTTCA
GTGTTCTGAGGAGTGGGTGCTACTGCAGTTTTGGTCTTCTTTGCTGGGACAGGTGTTTTGGAAGCAGATGCAGTGGCCCTCTTCTT
GTTGCTCGGCTGCTCAGGCTGCTTAGGGGTCTCCTCCTCTTCCTCTTCAACCTCCTCCTCCTCCTCAGAGTCATCTTCTTCATCCT
TCTCCTCCTCAGACTCATCATCATCATCAGACTCTGACTCAGGCTTCACTTCAGCAGGCTTGGCTTTTGGTTTTGAGCCAGCAGCC
TTGGAAGCAGCAGCAGCATTCCCAACGGAAGTGACAGTTGAAGTAGCAGGAACCACCTCCTCCTCCTCCTCTGAATCAGAAGGGTA
GTCCTCCTCTTGATCGATGTTGGGAGATCTGTAGCCAACAAAGTGGACACTACCACTCTCCAAAGAGTGAGAAAGCTCAAACTCCT
GCTCGAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_851056 histone deacetylase HDT2 [Arabidopsis thaliana]5994e-060
NP_197657 histone deacetylase HDT2 [Arabidopsis thaliana]5842e-058
XP_002872015 predicted protein [Arabidopsis lyrata subsp. lyrata]5682e-056
ACZ54947 type 2 histone deacetylase c [Nicotiana tabacum]3272e-028
EFB25393 hypothetical protein PANDA_005719 [Ailuropoda melanoleuca]1981e-013

Swiss-Prot top hits (Blast detail)Scoree value
Q56WH4 Histone deacetylase HDT25992e-061
Q9FVE6 Histone deacetylase HDT13653e-034
Q9LZR5 Histone deacetylase HDT32587e-022
P08199 Nucleolin1881e-013
O24591 Histone deacetylase HDT11744e-012

TrEMBL top hits (Blast detail)Scoree value
Q3E700 Putative uncharacterized protein At5g22650.25842e-058
B9SN80 Histone deacetylase 2a, putative2472e-019
D2H6T7 Putative uncharacterized protein (Fragment)1981e-013
Q9QZX1 Nucleolin-related protein NRP1801e-011
D3B343 Putative uncharacterized protein1763e-011

Arabidopsis top hits (Blast detail)Scoree value
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase6072e-063
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase5902e-061
AT3G44750.1 HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding3653e-035
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding2587e-023
AT5G55660.1 LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26630.2); Has 348612 Blast hits to 121147 proteins in 2910 species: Archae - 1231; Bacteria - 38190; Metazoa - 148268; Fungi - 42547; Plants - 15024; Viruses - 2447; Other Eukaryotes - 100905 (source: NCBI BLink).1413e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members