 |
Information for unigene UN69216
| FASTA Sequence |
| Unigene ID: UN69216 | Length: 514 |
SSR | | GGATGTCCGTTATTGTTAGCTTTGGTCCTACAGAGCCAACCAGAGAGAAGAACAAGTAGTAGTAGAAGAAGATCAGAGATTAACAT
TAATCATTAGAGACCATGGGGAAAGTCTTGAAAGCTTATCAAGAACAATGGGTTTAACTCTGTTCTCGATCACGTGATCTTGAAAC
TTTCTCTCCTCTTCACGGTGGTCCATGGAGATGGATGTTGAATCCGTGCTTCAGTTTCTCCGACGTAACGGCTTAACGGAGGCTGA
GTCTGCTCTGAGAGACGATATCAACGAGCAAAACCAACTCATTTCTTTTGACTTCGTGAAGTTTCTGTTTCCTATTCCTCCGCCGA
TCAGAATCACGGCGAGTCCTCTCCCTCATCCTCCTGATTCCTCCAAGTCTTCTTCAGAGGAAGAGTTTCAGCTTGGACTCTTTCAC
TTCCGGGTTTGTGAATCCGTATGGAGATGGTTCATCATCATCATCATCTGAATCCATGTCTCAGTTTGGTACGGCGCGTACATA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181541 protein kinase-like protein [Arabidopsis thaliana] | 245 | 2e-019 |
| ACU14915 unknown [Glycine max] | 180 | 8e-012 |
| XP_002272072 PREDICTED: hypothetical protein [Vitis vinifera] | 159 | 2e-009 |
| XP_002315156 predicted protein [Populus trichocarpa] | 154 | 8e-009 |
| XP_002533381 ATP binding protein, putative [Ricinus communis] | 153 | 1e-008 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XEE4 Hypothetical Ser-Thr protein kinase | 245 | 2e-019 |
| C6T092 Putative uncharacterized protein (Fragment) | 180 | 5e-012 |
| B9HSN4 Predicted protein | 154 | 6e-009 |
| B9T562 ATP binding protein, putative | 153 | 7e-009 |
| B9HHQ2 Predicted protein | 147 | 4e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G40120.1 protein kinase family protein | 245 | 1e-021 |
| AT1G06630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1); Has 1188 Blast hits to 1155 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1187; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 143 | 9e-010 |
| AT1G06630.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1). | 143 | 9e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
