Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN69369

FASTA Sequence
Unigene ID: UN69369Length: 662 SSR 
GGGTCTCTGTGCTCTCTCTCTCTACTCTTTACTTCTTCCGGCAGTCGATCACTCCGCTTTGATTCTGGTTAAGCTCGGAAGCTTTC
GGAGTTTGAAGCTGATTATCTATCCAAGTTATATATATAAAGACGATAGCCATGAGCTCGGTTTTGCAGGGTTTTACCAAGTCACT
GGCCATGACTTTTGTCTCTGAGATTGGCGACAAGACATTTTTCGCCGCAGCTATATTGGCGAGGCGTTATCCAAGGAGACTTGTGT
TGGCTGGTTGTGTATCTGCTCTTATTGTCATGACTATCCTCTCTGCTACTGTTGGATGGGCTGCTCCTAATCTCATTTCTCGCAAG
TGGACTCATCACATAACCACATTGTTGTTCTTTGCTTTCGGTCTTTGGTCTTTGTTTGACGGATTCAAAGGAGATGGAGGGGAATC
AGAAGAATTGGCTGAAGTCGAAGCAGAACTGGATTCTGATTTGAAGGCTAATGGTAAAGCTACCAAAGATAACAACAGTAAGACTG
ATGATGAAAACAAAAAAGAGAATGCCATTCCTCGCACAATTCTTCTCTCCAATCTTTCTCAAGGCATTTTCTATTAATTTCTTTGG
TGAATTTGGTGACAAGAGTCAGCTTGCTACTATTGGTTTAGCCGCCGATGAAATCCGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173923 putative transmembrane protein [Arabidopsis thaliana]5923e-059
AAM65603 transmembrane protein, putative [Arabidopsis thaliana]5896e-059
XP_002893419 hypothetical protein ARALYDRAFT_335795 [Arabidopsis lyrata subsp. lyrata]5833e-058
XP_002887196 hypothetical protein ARALYDRAFT_475991 [Arabidopsis lyrata subsp. lyrata]5492e-054
NP_177032 UPF0016 protein 5 [Arabidopsis thaliana]5376e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q4V899 Transmembrane protein 1652102e-016
P52875 Transmembrane protein 1652093e-016
Q9HC07 Transmembrane protein 1652084e-016
P38301 UPF0016 membrane protein YBR187W2013e-015
P52876 UPF0016 membrane protein sll06151672e-011

TrEMBL top hits (Blast detail)Scoree value
Q9C6M1 Putative transmembrane protein5922e-059
Q8LA33 Transmembrane protein, putative5894e-059
Q9SX28 At1g686505374e-053
B9ST29 Transmembrane protein TPARL, putative5062e-049
B9HWL1 Predicted membrane protein4962e-048

Arabidopsis top hits (Blast detail)Scoree value
AT1G25520.1 unknown protein5921e-061
AT1G68650.1 unknown protein5373e-055
AT5G36290.1 unknown protein2202e-018
AT5G36290.2 unknown protein2202e-018
AT4G13590.1 unknown protein1601e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members