RadishBase

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Information for unigene UN69502

FASTA Sequence

Unigene ID: UN69502	Length: 590	SSR
GTGTTTCGTGTAGATCGTTCTGCTGTAAGGCATAGTCTAGATGATGATTCCGGTGATGAAGAAGAAGAAGAAGAAGAGAGAGTTGT TGTTAGGAAGGGAGAAGCTGCTTGGGAGGATGAAGAAGAGAAAGAGATTAATATTAACTTTGCTTCGGTTAACCGTCTGAGGAAGC TGAGGAAAGAGGAGGACGAGGGTTTGATCTCTGGTTCTGAGTACATTGCTAGGCTGAGAGCTCATCACGCCAAGCTTAACCCTGGA ACAGATTGGGCTAAGACTGATTCTGGAATCACTGATGGAGACTCTTCAGATGAGGGGGAAGGTGGTGATGGTGATGATGATGATAT ACTCAGGACAAACGAAGATCTTGTGGTGAAGTCTGGTGGTTCCAAGCTGTGTTCTGGTCTTCTCGAGTACTCACAGCACGCGGACG CCAACATAGCAGATCCTCCAAACGCTCCGATTAACTCTGTCCAGTTCCATCAAAACGCTCAGCTGCTTCTCACCGCTGGGTTGGAC AGAAGGCTGAGGTTTTTCCAGATTGATGGGAAGAGGAACACCAAGATACAGAGCATTTTTCTAGAGGACTGTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002871598 transducin family protein [Arabidopsis lyrata subsp. lyrata]	761	5e-079
NP_196909 U3 small nucleolar RNA-associated protein 18-like protein [Arabidopsis thaliana]	746	3e-077
AAM65269 unknown [Arabidopsis thaliana]	746	3e-077
CBI17936 unnamed protein product [Vitis vinifera]	573	3e-057
XP_002281926 PREDICTED: hypothetical protein [Vitis vinifera]	570	7e-057

Swiss-Prot top hits (Blast detail)	Score	e value
Q9FMU5 U3 small nucleolar RNA-associated protein 18 homolog	746	1e-078
Q5SSI6 U3 small nucleolar RNA-associated protein 18 homolog	228	2e-018
P40362 U3 small nucleolar RNA-associated protein 18	228	2e-018
Q9Y5J1 U3 small nucleolar RNA-associated protein 18 homolog	227	2e-018
P78750 Probable U3 small nucleolar RNA-associated protein 18	218	2e-017

TrEMBL top hits (Blast detail)	Score	e value
Q8LAL9 Putative uncharacterized protein	746	2e-077
B7FLG4 Putative uncharacterized protein	562	4e-056
Q2HU46 Putative uncharacterized protein	559	9e-056
C5XMN7 Putative uncharacterized protein Sb03g003690	490	9e-048
C5Z1T0 Putative uncharacterized protein Sb10g029900	489	1e-047

Arabidopsis top hits (Blast detail)	Score	e value
AT5G14050.1 transducin family protein / WD-40 repeat family protein	746	1e-079

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			100%

Unigene Members