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Information for unigene UN69635

FASTA Sequence
Unigene ID: UN69635Length: 793 SSR 
GGATTGTCATATCCGCTCCGTTCCCAATTTGTGTGTCGAGAGAGAGAGAGAGAGATATCTAGGGTTTGTACGATTCTCCAGCGACG
ATGCTAAGCGACGATTTCACGGCGAAACGAGCTGCGGCCGAGGAGGAATCGGACTCTTCTGTCTCGAAAAAGCAGAAGTTGGAAGA
TGAAGACGACGACGACGACACAAGCATGTAAGAGGATAGCGATACCGACAGCGGACGCGCATGGTCTGTCGACACTGAAGAAGAAG
AAGACGAAGGAGTGGTGAGATCTCCTAGGATTAATTACTTAAACTTCCCAGAACCGGAACCGGAGTGGGATAAGGACAGCTTCGAT
GGTTACGAGTTCTACAACCCCGAGGACCGTAAAAGCTTCTCCGACGACGAGGAGTACGAAGTGTTCCGCGACTTTAAGATCCAGGC
CTGGAAGAATCGGGGTTTTTATGAACAAGATCCCTTCAGGTCCATCTTCCCCCTTACTGATCTGGAAGAACCTTGGATTGACATGA
CCACAAGGGAATATTTGGAGTCTATTGCCTCCTTATGTGTTAAGAAACTCAACGAGGAGAAGATAAGACCGTGGAATTGGTAAGCA
TCGTTAGAGGCAATATGAAAGTAGAGATGGTTGGAAGCTGTACATCACCTTTATGGCTCGAGAGTATACCAATGGTCCTCTTGTGG
AGCATCAAGCCAAGCTATGGATTTGGAGCAAAACTCCCTTTCCCATCTCTGCGACAGCTCTCCAAATCCTAATCTGTGACTGCATA
GATTGGTATGCTGGTGGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884527 hypothetical protein ARALYDRAFT_896657 [Arabidopsis lyrata subsp. lyrata]1605e-009
XP_002884511 predicted protein [Arabidopsis lyrata subsp. lyrata]1571e-008
XP_002884528 hypothetical protein ARALYDRAFT_896658 [Arabidopsis lyrata subsp. lyrata]1552e-008

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LFJ1 Putative uncharacterized protein F2K13_2702562e-020
B6KEJ8 Poly(A) polymerase, putative1301e-005

Arabidopsis top hits (Blast detail)Scoree value
AT5G17120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17150.1); Has 47 Blast hits to 45 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2561e-022
AT5G17150.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, embryo, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 23 Blast hits to 23 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2426e-021
AT5G17090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 28 Blast hits to 26 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2418e-021
AT3G05685.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17090.1); Has 28 Blast hits to 26 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1225e-007
AT5G17110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17100.1); Has 34 Blast hits to 32 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1208e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members