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Information for unigene UN69665
| FASTA Sequence |
| Unigene ID: UN69665 | Length: 544 |
SSR | | GCTACTTGGACCATTTGAGAGGGATCAAGAACACTGGCGGCCGTTCTAACTTCTACTCTAACCCTAAGTTCGAAGGCGAGCATCTT
CCTCGTGACGACGTCAAGCTTACGATGCGTCTCGTGTGAAGGTCTCTGGTGTGGTGGTGGATGGTGGTGGAGATGATGATAAGTTG
ATGTATAGCGTGGCGTCCAAGACTGTTAATGTCAAGGTGAAGAAGGCTATTGATCCTGAAGTGGCGGCTTTGCTTGAGGATAGCGA
TGGGTCTGAGTTTGGTTCTGATGTTGAGGATTTGGAGGAGGATTTCGTTGTTCAAGCTCAAGAGGGAGAGGGTGGTGGTTCTGGTG
TGGGTAATGAGGAGGAGTTTGCTGATGAGAGACCTGTGGCTGAAAGCAAGCCGAGAGTTATGCGTCAGATTGATGAGATGTTTGAT
CAGCTTGAGCTTAATGAGTATGGAAGTGAGAGTGAAGACAATGATGGTTACCAAGAGGAAGAAGAAGAAGAAGAGTTCAATGCTCA
GAGCGTTGGTAATGATTTTATTTACGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002877717 hypothetical protein ARALYDRAFT_485357 [Arabidopsis lyrata subsp. lyrata] | 429 | 1e-040 |
| NP_190568 uncharacterized protein [Arabidopsis thaliana] | 312 | 4e-027 |
| XP_002306905 predicted protein [Populus trichocarpa] | 291 | 1e-024 |
| XP_002510479 conserved hypothetical protein [Ricinus communis] | 236 | 3e-018 |
| XP_002280700 PREDICTED: hypothetical protein [Vitis vinifera] | 209 | 4e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94317 Uncharacterized serine-rich protein C215.13 | 131 | 2e-007 |
| Q17RH7 Putative protein TPRXL | 117 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9SN19 At3g49990 | 312 | 3e-027 |
| B9H4I8 Predicted protein | 291 | 9e-025 |
| B9R836 Putative uncharacterized protein | 236 | 2e-018 |
| B9GRG7 Predicted protein | 201 | 2e-014 |
| Q84TS4 Low temperature viability protein, expressed | 173 | 4e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G49990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Low temperature viability protein (InterPro:IPR007307); Has 1404 Blast hits to 1163 proteins in 173 species: Archae - 5; Bacteria - 61; Metazoa - 489; Fungi - 146; Plants - 69; Viruses - 17; Other Eukaryotes - 617 (source: NCBI BLink). | 312 | 2e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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