Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN69700

FASTA Sequence
Unigene ID: UN69700Length: 460 SSR 
TCATATAAAGAGAGAGATTCAACATCTTCACTGATTCTTTCTTCATTTTTTTACACACAAAACAAACAAAAAACTGCAAATTCAAA
CAAATCCCTAAAGCCCCCCCTATATTATATAAAACTACAAAACATAAAACCTCTTAGTTAGGACTCGTCTCTGTTCTGTCCTCTGG
GCCAGCAAGCGTCACATCGCAATCACAAGCGAATCTGCGTGCAAGCATGATGGCAGCGTTTCTCTCTCTCTCAAATTCAAAAGCTA
CCACAAAGGACACTCCTTTCTTTGCCTGCCAATACACTGCCTGAGCTGCCGCGTTCCCACCTCCTCTCACTCCACATAGCTGCATT
GCACTAAAGTAATACTCTTTGGCAATCACCGTCTTTCCCTTGCAAAGTTTAATCCTCATTTTACCAACGTGAAACAAGTGGATAGA
TTCTGATGTATGGTCTTCCCCACTCATTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180245 plectin-related protein [Arabidopsis thaliana]5156e-051
XP_002880833 hypothetical protein ARALYDRAFT_481549 [Arabidopsis lyrata subsp. lyrata]5121e-050
XP_002269709 PREDICTED: similar to plectin-related [Vitis vinifera]4288e-041
CBI24323 unnamed protein product [Vitis vinifera]4288e-041
XP_002299966 predicted protein [Populus trichocarpa]4181e-039

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O48791 Putative uncharacterized protein At2g267705154e-051
B9GFS8 Predicted protein4187e-040
C6TC02 Putative uncharacterized protein4115e-039
B9SB74 Transcription factor, putative4071e-038
B9HNJ6 Predicted protein4062e-038

Arabidopsis top hits (Blast detail)Scoree value
AT2G26770.1 plectin-related5155e-053
AT2G26770.2 plectin-related5155e-053
AT2G40820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 2697 Blast hits to 2260 proteins in 261 species: Archae - 3; Bacteria - 96; Metazoa - 995; Fungi - 432; Plants - 786; Viruses - 39; Other Eukaryotes - 346 (source: NCBI BLink).3023e-028
AT3G56480.1 myosin heavy chain-related2834e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members