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Information for unigene UN69778

FASTA Sequence
Unigene ID: UN69778Length: 793 SSR 
CTGATAAGTTCTGATTATTCTTTGATAACACCTTGTAGAGTTCCAATGATCAGCTTGCATTGAAATCACCGTTGTGAACCAAACAA
AAAATGTACCAAACTGTTTAGACATGGTTTTACAACAGGAAGACAGTTAAAATCATGTCTTTTCTCCATTTCCTGTCTGAAACCAA
AAACAAAAACTCAAAAGTAGAGAGAATATTATTCTTGCAGCCACTAAATAGTAACAATGGCTACCTCCAAACTGATTCATCAAAGA
AGACTATCATCATCATCATCATAATGTTAACTCCATCCCCATTGGAGAAGAATCCATTATAACATACTAAAACCAGACAACAAAAT
TCAAATCTTTCCATATGATCATTAGCTCTCTCTCCATCAGAGGCCTCTTCTTATGTACATTAATTTTTGCAAATCACTCCTCTGTT
GATTTTTTCCAGTTTACTCTTCTTTCCAGATTCGACCAGTTACCCTCAACTTGAGTTCTTGCCTATCACCTCCAGAGAAGTAGAGT
GCAAGGTTTCTTGGGATGATGAGACCGTCTTGACTGTCTCGAACTTTCCTGTGACTGTCACGGATGCTTCTAGGGATCCCTTGCCA
TGTTAGTTTACGTCCATGAGCTCCTACTTCCAGGCTGTAACTGAACTTCTTCGCCTCGTTTTCATCTCCCATGAAACGGAGAAACG
CCATGTACACTGGTGCCATCCCTAGCTGGAAAGCCTCAAAGTGTAAACAGAACTGTCTCCCAAAACAGTTGAACACCGTAAGCATC
CATGTAGCATTTTCGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191363 E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]6158e-062
XP_002876454 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]6158e-062
NP_181729 ubiquitin-protein ligase SIAH1 [Arabidopsis thaliana]5971e-059
XP_002881813 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]5971e-059
XP_002308357 predicted protein [Populus trichocarpa]5871e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2P4 E3 ubiquitin-protein ligase SINAT26154e-063
P93748 Putative E3 ubiquitin-protein ligase SINAT15974e-061
Q84JL3 E3 ubiquitin-protein ligase SINAT35293e-053
Q9STN8 E3 ubiquitin-protein ligase SINAT45268e-053
Q8S3N1 E3 ubiquitin-protein ligase SINAT55204e-052

TrEMBL top hits (Blast detail)Scoree value
B9HA10 Predicted protein5871e-058
B9IIA7 Predicted protein5833e-058
B9T806 Ubiquitin ligase SINAT2, putative5798e-058
Q9XGC3 SINA2p5663e-056
C6TM08 Putative uncharacterized protein5628e-056

Arabidopsis top hits (Blast detail)Scoree value
AT3G58040.1 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding6163e-064
AT2G41980.1 seven in absentia (SINA) family protein5983e-062
AT3G61790.1 seven in absentia (SINA) family protein5293e-054
AT4G27880.1 seven in absentia (SINA) family protein5267e-054
AT5G53360.1 seven in absentia (SINA) family protein5203e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members