 |
Information for unigene UN69825
| FASTA Sequence |
| Unigene ID: UN69825 | Length: 640 |
SSR | | GTAAAGCTCTTTTATATGTTTCAACAACAACAACAAAGCAAGGTTCTCACTCACCATAACAAGTAAATAGTTAAAATGTAATCTGA
TGAGTGAAGATTTAATAAAATAAAACAACAAAGCAAGAGGAGCTAAAGGATAATGTCTTTGTCTGTTGTCTGGTGGTGGGATTAGT
ATGGGCGGTACCTCCAGTCTGATCTTGATGGTCTTGCGCTCGGAACTCCATATCCCCAATCGTCCAAGCTCATGGCTCCTCCATAC
ATCGACCAAAAGTGCGCATTGGACCACCTCCAGCGTAACCACCAAAATGTTCAGGACGAGAAGAAAAAGTACTTCCTCCACCACCA
GCGCCGCTAGGTCCACCAGCTTCATCAAGAGGTGTTGCTGAATCTATTGCTACCTCTTGTCCACAGATTTCATGAGATCTCCTGGC
TACACGATCCGCAACACCGTTCTCAGCAAAGGTAACGAATCCAAATCCTCTATGTCCACTTCTTTTCGGATCCTTTGGAATGTATG
CATCTTGAATACGGCCAAATCTACCGAAGTAGTCGCGGAGATCATCAACGGATGCTTCTTGAGGAAGGCGTCCAACAAAGATCTTG
TTTCCTATTCCTCTCGTTGGTTCAGCTCTTCCATAGAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB16795 RNA-binding like protein [Arabidopsis thaliana] | 548 | 3e-054 |
| NP_568011 RNA recognition motif-containing protein [Arabidopsis thaliana] | 548 | 3e-054 |
| XP_002866967 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 545 | 7e-054 |
| XP_002307266 predicted protein [Populus trichocarpa] | 447 | 2e-042 |
| XP_002310138 predicted protein [Populus trichocarpa] | 445 | 3e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48809 Heterogeneous nuclear ribonucleoprotein 27C | 170 | 1e-011 |
| Q99383 Nuclear polyadenylated RNA-binding protein 4 | 162 | 8e-011 |
| Q9VVE5 RNA-binding protein Musashi homolog Rbp6 | 162 | 8e-011 |
| O43347 RNA-binding protein Musashi homolog 1 | 158 | 2e-010 |
| Q61474 RNA-binding protein Musashi homolog 1 | 157 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23189 RNA-binding like protein | 548 | 2e-054 |
| Q94AC3 AT4g36960/C7A10_400 | 548 | 2e-054 |
| B9H6G5 Predicted protein | 447 | 1e-042 |
| B9HHC2 Predicted protein | 445 | 2e-042 |
| A5BFC4 Putative uncharacterized protein | 439 | 9e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36960.1 RNA recognition motif (RRM)-containing protein | 548 | 1e-056 |
| AT4G36960.2 RNA recognition motif (RRM)-containing protein | 548 | 1e-056 |
| AT5G47620.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 164 | 5e-012 |
| AT5G40490.1 RNA recognition motif (RRM)-containing protein | 164 | 5e-012 |
| AT5G47620.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 164 | 5e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
