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Information for unigene UN69901
| FASTA Sequence |
| Unigene ID: UN69901 | Length: 406 |
SSR | | ATAGAATTCAAAAGCGCATAGTTGGTAGTTATATTGGTCTTTAACACACCACACCACAAAAGAAGCAGCACAAGCTGTGCTATATA
TCAAGAGAGAGAGAGACCCACACGACACAACCGTGGTAACCCCATCTTTTGCTTGATTGACTCATCTGACAAAAACCCCCCCTATA
AGATGTGCTTCCATGATGCTGGACGATCTCTTGAGATGAGGAGGACACGAGAACTCGCATAATCAAAGGAAGGACAATACATATCG
TTTGGACCAATAACCTCTTTAACGGTTCCATTGTCCCCACCTATCAAAGGCTCTTCTTTTGCAGTATCAAACACGAAAAGTCCCAT
ACCGGAAGTAGCCATGACAAAGTTCGAATTTCCCCAGACTTGGGTTATTGCAAAGTGGTGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193167 transducin/WD40 domain-containing protein-like protein [Arabidopsis thaliana] | 318 | 5e-028 |
| NP_849378 transducin/WD40 domain-containing protein-like protein [Arabidopsis thaliana] | 318 | 5e-028 |
| XP_002868293 hypothetical protein ARALYDRAFT_493476 [Arabidopsis lyrata subsp. lyrata] | 313 | 2e-027 |
| XP_002453013 hypothetical protein SORBIDRAFT_04g036720 [Sorghum bicolor] | 270 | 2e-022 |
| NP_001169953 hypothetical protein LOC100383852 [Zea mays] | 266 | 5e-022 |
| Swiss-Prot top hits | Score | e value |
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| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q2V3I5 Putative uncharacterized protein At4g14310.1 | 318 | 3e-028 |
| Q3EA32 Putative uncharacterized protein At4g14310.2 | 318 | 3e-028 |
| C5XV81 Putative uncharacterized protein Sb04g036720 | 270 | 1e-022 |
| C0PJI3 Putative uncharacterized protein | 266 | 3e-022 |
| B9HSG8 Predicted protein | 253 | 1e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G14310.2 INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); Has 1571 Blast hits to 1320 proteins in 206 species: Archae - 6; Bacteria - 142; Metazoa - 581; Fungi - 102; Plants - 66; Viruses - 5; Other Eukaryotes - 669 (source: NCBI BLink). | 319 | 2e-030 |
| AT4G14310.1 INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); Has 1586 Blast hits to 1332 proteins in 204 species: Archae - 6; Bacteria - 138; Metazoa - 590; Fungi - 104; Plants - 66; Viruses - 5; Other Eukaryotes - 677 (source: NCBI BLink). | 319 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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