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Information for unigene UN70047

FASTA Sequence
Unigene ID: UN70047Length: 729 SSR 
GGATCAGAGGCGATTTCCGACGTTATCCGTCGACAATCTCTCTCTCTCCTCCATGGCCTCCTTCGCGCTTCTTCGGTCTCTCCGTC
GCTGTTACTCTGATTTACACAAAGATTACAACTATAGAAATGAGTTTAATGGCGAGGCAAAGGCCAAAACAGGATTGGTTCTTCCA
AGCTCGGTTTTGATGGGGAAGAATACAGTTGGGTTTTTGTTAAGAAGCAGAGAGTCATCATTGTCATGCCTTCTTTCACTCTGGAT
TGTTGCTGCTGATAATAGTTAAGAAACTGTTCGTGTGGTGGTACCAACTATTTTACATTACTGCCAACTATTTTATTGTAGCATTC
GGCTAATGTCTTCTCAATCTCTTAATGCTTTGGTATGTTATGGGAATAAAAGAGCTGGATGGTTTGGAACAAAAGGCTAAGGCTAG
TGGTGCTTCTCAGTTGGTCGTTAAGGACCTCACGGAGGAGTTCGTGAAAGATTACATATTCCCTTGTCTTAGAGCTGGTGCCATCT
ATGAACGAAAATGAAGACACTCAAGGATGTGGGAGCCATAGGGAAGCAAATAGAAGACGGAGTAAGACTAATGGGTCGTGGTGCTG
ATGAGATCAAATGGCCTCTTCATTTTGAGGTCTCGAGAGTGTATTACAACAAATTGGGCTTGAGGGCGTTGCTTAACCGGAATGGT
TTGAGAAGAAAGGAAGCTATTGCCAAAGCAGCGAGACGCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867641 arginosuccinate synthase family [Arabidopsis lyrata subsp. lyrata]2322e-017
NP_194214 argininosuccinate synthase [Arabidopsis thaliana]2285e-017
CAB41123 argininosuccinate synthase-like protein [Arabidopsis thaliana]2285e-017
NP_001119047 argininosuccinate synthase [Arabidopsis thaliana]2285e-017
ACU18522 unknown [Glycine max]2204e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZX3 Argininosuccinate synthase, chloroplastic2282e-018
B2TQ23 Argininosuccinate synthase1574e-010
A6M1Z4 Argininosuccinate synthase1565e-010
B2UYI0 Argininosuccinate synthase1557e-010
C4Z9C9 Argininosuccinate synthase1531e-009

TrEMBL top hits (Blast detail)Scoree value
B3H778 Argininosuccinate synthase2283e-017
C6T9M0 Argininosuccinate synthase2203e-016
C7G0W8 Argininosuccinate synthetase (Fragment)2169e-016
B9S599 Argininosuccinate synthase2132e-015
B9SS35 Argininosuccinate synthase2132e-015

Arabidopsis top hits (Blast detail)Scoree value
AT4G24830.1 arginosuccinate synthase family2282e-019
AT4G24830.2 arginosuccinate synthase family2282e-019
AT5G64670.1 ribosomal protein L15 family protein1995e-016
AT3G11860.1 unknown protein1191e-006
AT3G11890.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sterile alpha motif SAM (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif homology 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11860.1); Has 789 Blast hits to 453 proteins in 90 species: Archae - 0; Bacteria - 10; Metazoa - 495; Fungi - 83; Plants - 33; Viruses - 5; Other Eukaryotes - 163 (source: NCBI BLink).1144e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members