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Information for unigene UN70085
| FASTA Sequence |
| Unigene ID: UN70085 | Length: 761 |
SSR | | GTATCAACGTTTAATGAACACAATGAAAGGAGTCTTTAAGAGGGTAGATAATCTCTCTCTCTCTCTCTCTCTCACCTCTCTTGCTC
TGTGGGAACCAACCTTGGATCAAATCACAAGCAGTCCAAACCACATATCTCGAGAATAGGACCACCTTTAGCCACAAACGGGTTAA
CCCTTACCCAAAGAAGAGTAAGAATAGAAGCCAGGAGAATAGACCAGACGACAAGAATGGTCGGCATTCTATCTTGTTTCCCAAGC
AAACCTTTAAGGAAAGGGTAAAGATGAATCACCACCCAAAGAGCAAAGAACAACCTTCCAAAAAGCGGTCCCCATGAGTCATAACC
ATTGCTTATAGCATCAGAGATTCCCACCACGATTCCAATGACGTTTATGATGAGAAGAGTCGTGGGAGGAATGAGAAGTGAAGTCC
ATTTGAAGAGGTAAAGGTCTGAAAACTCTCCATCATCAGCTGCCTTTGACGTGACAGTGAAGTTAGTGTCCACACCAGCGAGAACC
TTGAGAAGACCTTGGAAGAGAGCAAAGAGATGCGCTGAAACTCCTCCTATGACCCAAAACTGTTCATTTCTCCACCAGTCATCGAT
CCCAACTTTGCCCCATTGCATCTCCAGAACACCAGTTACTGCAATGGACGAGAAGAGTGCCATGAAGAGGATACTAGCATAGTTAC
TTATCTCTGGAACAATGAATTTGCCTGTGAGAAGACAAATGGCTGGGAGAGAACAGTAGACAATGAGTGGGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABI34115 cellulose synthase catalytic subunit [Brassica napus] | 1129 | 2e-121 |
| ACS68196 cellulose synthase 6.1 catalytic subunit [Brassica napus] | 1129 | 2e-121 |
| XP_002862432 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1125 | 5e-121 |
| NP_201279 cellulose synthase A catalytic subunit 6 [UDP-forming] [Arabidopsis thaliana] | 1118 | 3e-120 |
| AAK53023 AT5g64740/MVP7_7 [Arabidopsis thaliana] | 1118 | 3e-120 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JQ6 Cellulose synthase A catalytic subunit 6 [UDP-forming] | 1118 | 2e-121 |
| Q8L778 Cellulose synthase A catalytic subunit 5 [UDP-forming] | 1099 | 3e-119 |
| Q9SJ22 Probable cellulose synthase A catalytic subunit 9 [UDP-forming] | 1064 | 3e-115 |
| O48947 Cellulose synthase A catalytic subunit 2 [UDP-forming] | 1056 | 3e-114 |
| Q6YVM4 Probable cellulose synthase A catalytic subunit 6 [UDP-forming] | 912 | 1e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0GPY3 Cellulose synthase catalytic subunit | 1129 | 1e-121 |
| B9HGC9 Predicted protein | 1058 | 2e-113 |
| B9HGD0 Predicted protein (Fragment) | 1058 | 2e-113 |
| C6KF42 Cellulose synthase catalytic subunit (Fragment) | 1045 | 7e-112 |
| B9T5I4 Cellulose synthase A catalytic subunit 6 [UDP-forming], putative | 1044 | 9e-112 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G64740.1 CESA6 (CELLULOSE SYNTHASE 6); cellulose synthase/ transferase, transferring glycosyl groups | 1119 | 1e-122 |
| AT5G09870.1 CESA5 (CELLULOSE SYNTHASE 5); cellulose synthase/ transferase, transferring glycosyl groups | 1100 | 2e-120 |
| AT2G21770.1 CESA9 (CELLULOSE SYNTHASE A9); cellulose synthase/ transferase, transferring glycosyl groups | 1064 | 3e-116 |
| AT4G39350.1 CESA2 (CELLULOSE SYNTHASE A2); cellulose synthase/ transferase, transferring glycosyl groups | 1056 | 2e-115 |
| AT5G05170.1 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/ transferase, transferring glycosyl groups | 869 | 1e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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