Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN70099

FASTA Sequence
Unigene ID: UN70099Length: 768 SSR 
CACTTTGTCGCCGTCGCTCGATTCTAAGGGATTGAACAAAATGGGCAAGCACAGGAAGAGAGATACTGATTCGGATGATGAGACTG
CATCTCCGTCGTCTTGTTCCTCTTACACCTCCGATGACTCCGATTCATCTTCTAGAAAGCGGCGGAGGAAGCAAAAGGAGCGGCGG
AGAAGCAACGAGGGAAGTTACGAGCGGAGGAAGAGAGAGAAGAGGAAGAAGATTGAGAGAAAGAGGAAAGATAGGAAGAAGAGGAC
GAGGACGAAGAAGAAGAAGAAGCGTGACTACGAGTCTGATTCAGAGTCTCAGTCTGATTCTGACTACTCCATGTCTGATCAAGAGG
ATGATCCTGAAACAGTTGTAAAGGAGATGCTCATAGAGTTTCCTAACGTTGGCAATGATTTGAAACAGCTTTTGAAAATGATAGAT
GATGGGCAAGCGGTTGATATAAAGGGTATTTCGGAGATCGCTTTGAAGAAGAGGTTGAAGAAGCTCTTTCTATCTTTGAAGTTAAA
GGAACGTGGGGATAGACTCTTTTTGTTGCCACCAGGTGCTTCTCCTTCTTTAGATGTGGTGGGACATCTAATTAAAGGCGGCGAGG
AAGAAGTTGAGAAAAACCTTGATGATTCTGCCCCTTTGAAGAACAGTGAAGCAGCTACTACTGTAGCAGATGAGAACACTCGTGGA
GCAGATGATATTGCTGGTCCAAAGAAAAGGTGATTGGACCTGCAATGCCATCGGCTGAGCTACTTGCTGCAGCAGCAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886835 hypothetical protein ARALYDRAFT_475539 [Arabidopsis lyrata subsp. lyrata]8272e-086
AAC27138 Contains similarity to DnaJ gene YM8520.10 gb|825566 from from S. cerevisiae cosmid gb|Z49705. ESTs gb|Z47720 and gb|Z29879 come from this gene [Arabidopsis thaliana]8253e-086
NP_176707 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]8253e-086
XP_002325992 predicted protein [Populus trichocarpa]4652e-044
XP_002526820 conserved hypothetical protein [Ricinus communis]4543e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q9VJ87 Pre-mRNA-splicing factor CWC22 homolog1468e-009
Q751P0 Protein PXR11413e-008
A4R0T9 Protein PXR11342e-007
Q54FL0 Myb-like protein O1333e-007
Q6C1L3 Protein PXR11271e-006

TrEMBL top hits (Blast detail)Scoree value
O80799 T8F5.5 protein8252e-086
Q0WVU7 Putative uncharacterized protein At1g652808252e-086
B9IQJ3 Predicted protein4651e-044
B9SLF1 Putative uncharacterized protein4542e-043
A5AXU1 Putative uncharacterized protein3745e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G65280.1 heat shock protein binding8251e-088
AT5G53800.1 unknown protein1387e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members